Evidence map›Paper›PMID 24791647›Full record

ArticleJournal of the American Chemical Society2014

Peroxygenase and oxidase activities of dehaloperoxidase-hemoglobin from Amphitrite ornata.

David A Barrios, Jennifer D'Antonio, Nikolette L McCombs, Jing Zhao, Stefan Franzen, Andreas C Schmidt, Leslie A Sombers, Reza A Ghiladi

Open access · bronzeAbstract read
In one paragraph

Article in Journal of the American Chemical Society, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
2.1field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 49 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Production of indigo by recombinant bacteria.Bioresources and bioprocessing · 2023
    Review
  6. Article
  7. Article
  8. Review
  9. An overview of microbial indigo-forming enzymes.Applied microbiology and biotechnology · 2020
    Review
  10. Article
  11. Selective tuning of activity in a multifunctional enzyme as revealed in the F21W mutant of dehaloperoxidase B from Amphitrite ornata.Journal of biological inorganic chemistry : JBIC : a publication of the Society of Biological Inorganic Chemistry · 2018
    Article
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

David A BarriosDepartment of Chemistry, North Carolina State University , Raleigh, North Carolina 27695-8204, United States.
Jennifer D'Antonio
Nikolette L McCombs
Jing Zhao
Stefan Franzen
Andreas C Schmidt
Leslie A Sombers
Reza A Ghiladi
North Carolina State University · US

Funding

Time-domain/ELDOR EPR SpectrometerS10RR023614 · NCRR · NORTH CAROLINA STATE UNIVERSITY RALEIGH · PI SMIRNOV, ALEX I. · 2009 to 2009
$500k
NCRR NIH HHS S10 RR023614NCRR NIH HHS S10RR023614
6 · The paper itself

Abstract

The marine globin dehaloperoxidase-hemoglobin (DHP) from Amphitrite ornata was found to catalyze the H2O2-dependent oxidation of monohaloindoles, a previously unknown class of substrate for DHP. Using 5-Br-indole as a representative substrate, the major monooxygenated products were found to be 5-Br-2-oxindole and 5-Br-3-oxindolenine. Isotope labeling studies confirmed that the oxygen atom incorporated was derived exclusively from H2O2, indicative of a previously unreported peroxygenase activity for DHP. Peroxygenase activity could be initiated from either the ferric or oxyferrous states with equivalent substrate conversion and product distribution. It was found that 5-Br-3-oxindole, a precursor of the product 5-Br-3-oxindolenine, readily reduced the ferric enzyme to the oxyferrous state, demonstrating an unusual product-driven reduction of the enzyme. As such, DHP returns to the globin-active oxyferrous form after peroxygenase activity ceases. Reactivity with 5-Br-3-oxindole in the absence of H2O2 also yielded 5,5'-Br2-indigo above the expected reaction stoichiometry under aerobic conditions, and O2-concentration studies demonstrated dioxygen consumption. Nonenzymatic and anaerobic controls both confirmed the requirements for DHP and molecular oxygen in the catalytic generation of 5,5'-Br2-indigo, and together suggest a newly identified oxidase activity for DHP.

Indexed as

AnimalsCatalytic DomainHemoglobinsIndolesMixed Function OxygenasesModels, MolecularOxidoreductasesOxygenOxygen ConsumptionOxygen RadioisotopesPolychaetaProtein ConformationHemoglobinsIndolesMixed Function OxygenasesOxidoreductasesOxygenOxygen Radioisotopesperoxygenase

Identifiers

PMID24791647
PMCPMC4063182
OpenAlexW2320168885

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.