Evidence map›Paper›PMID 24790087›Full record

ArticlePhysiological genomics2014

Transcriptional profiling reveals ductus arteriosus-specific genes that regulate vascular tone.

Elaine L Shelton, Gerren Ector, Cristi L Galindo, Christopher W Hooper, Naoko Brown, Irene Wilkerson, Elise R Pfaltzgraff, Bibhash C Paria, Robert B Cotton, Jason Z Stoller and 1 more

Open access · greenAbstract read
In one paragraph

Article in Physiological genomics, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
1.9field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed, 39 citations in OpenAlex.

  1. Review
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  5. A novel role for PGEAmerican journal of physiology. Heart and circulatory physiology · 2023
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 2 institutions in 1 country.

Elaine L SheltonDepartment of Pediatrics, Vanderbilt University School of Medicine, Nashville, Tennessee; Elaine.L.Shelton@vanderbilt.edu.
Gerren EctorDepartment of Pediatrics, Vanderbilt University School of Medicine, Nashville, Tennessee;
Cristi L GalindoDepartment of Medicine, Vanderbilt University School of Medicine, Nashville, Tennessee; and.
Christopher W HooperDepartment of Pediatrics, Vanderbilt University School of Medicine, Nashville, Tennessee;
Naoko BrownDepartment of Pediatrics, Vanderbilt University School of Medicine, Nashville, Tennessee;
Irene WilkersonDepartment of Pediatrics, Vanderbilt University School of Medicine, Nashville, Tennessee;
Elise R PfaltzgraffDepartment of Cell and Developmental Biology, Vanderbilt University School of Medicine, Nashville, Tennessee;
Bibhash C PariaDepartment of Pediatrics, Vanderbilt University School of Medicine, Nashville, Tennessee;
Robert B CottonDepartment of Pediatrics, Vanderbilt University School of Medicine, Nashville, Tennessee;
Jason Z StollerDepartment of Pediatrics, Perelman School of Medicine at the University of Pennsylvania, Children's Hospital of Philadelphia, Philadelphia, Pennsylvania.
Jeff ReeseDepartment of Pediatrics, Vanderbilt University School of Medicine, Nashville, Tennessee; Department of Cell and Developmental Biology, Vanderbilt University School of Medicine, Nashville, Tennessee;
Vanderbilt University · USUniversity of Pennsylvania · US

Funding

Genes contributing to patent ductus arteriosus susceptibility in preterm newbornsR01HL109199 · NHLBI · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI CLYMAN, RONALD I · 2011 to 2014
$3.0M
Hamster: A Unique Model for Studying ImplantationR01HD044741 · NICHD · VANDERBILT UNIVERSITY · PI PARIA, BIBHASH CHANDRA · 2004 to 2014
$2.9M
Mechanisms of Ductus Arteriosus RegulationR01HL077395 · NHLBI · VANDERBILT UNIVERSITY · PI REESE, JOHN JEFFREY · 2006 to 2010
$2.0M
Role of natriuretic peptides in the ductus arteriosusR01HL096967 · NHLBI · VANDERBILT UNIVERSITY · PI REESE, JOHN JEFFREY · 2010 to 2013
$1.5M
The anti-fibrotic effects of neuregulin in the heartK01HL121045 · NHLBI · VANDERBILT UNIVERSITY MEDICAL CENTER · PI GALINDO, CRISTI LARA · 2014 to 2018
$747k
NHLBI NIH HHS HL-109199NHLBI NIH HHS HL-77395NHLBI NIH HHS HL-96967NHLBI NIH HHS K01 HL121045NHLBI NIH HHS R01 HL077395NHLBI NIH HHS R01 HL096967NHLBI NIH HHS R01 HL109199NICHD NIH HHS HD-44741
6 · The paper itself

Abstract

Failure of the ductus arteriosus (DA) to close at birth can lead to serious complications. Conversely, certain profound congenital cardiac malformations require the DA to be patent until corrective surgery can be performed. In each instance, clinicians have a very limited repertoire of therapeutic options at their disposal - indomethacin or ibuprofen to close a patent DA (PDA) and prostaglandin E1 to maintain patency of the DA. Neither treatment is specific to the DA and both may have deleterious off-target effects. Therefore, more therapeutic options specifically targeted to the DA should be considered. We hypothesized the DA possesses a unique genetic signature that would set it apart from other vessels. A microarray was used to compare the genetic profiles of the murine DA and ascending aorta (AO). Over 4,000 genes were differentially expressed between these vessels including a subset of ion channel-related genes. Specifically, the alpha and beta subunits of large-conductance calcium-activated potassium (BKCa) channels are enriched in the DA. Gain- and loss-of-function studies showed inhibition of BKCa channels caused the DA to constrict, while activation caused DA relaxation even in the presence of O2. This study identifies subsets of genes that are enriched in the DA that may be used to develop DA-specific drugs. Ion channels that regulate DA tone, including BKCa channels, are promising targets. Specifically, BKCa channel agonists like NS1619 maintain DA patency even in the presence of O2 and may be clinically useful.

Indexed as

TranscriptomeAnimalsDuctus ArteriosusDuctus Arteriosus, PatentEmbryo, MammalianGene Expression ProfilingGene Expression Regulation, DevelopmentalIon ChannelsMiceMice, TransgenicMicroarray AnalysisVascular PatencyVasodilationIon ChannelsBKCaductus arteriosusion channelsPDAvascular tone

Identifiers

PMID24790087
PMCPMC4080279
OpenAlexW2045700058

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.