ArticleSystematic biology2014
A gateway for phylogenetic analysis powered by grid computing featuring GARLI 2.0.
Article in Systematic biology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 73 papers.
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Who cites it
73 citing papers in PubMed.
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- A Contribution Towards Resolving the Systematics of the High-Altitude Tropical Andean Satyrine Genus Altopedaliodes Forster, 1964 (Lepidoptera, Nymphalinae: Satyrinae).Neotropical entomology · 2021Article
- Symbiont Genomic Features and Localization in the Bean BeetleApplied and environmental microbiology · 2021Article
- The "Jack-of-all-Trades" Flagellum FromFrontiers in microbiology · 2021Article
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- Asynchrony between virus diversity and antibody selection limits influenza virus evolution.eLife · 2020Article
- Multiple colonization and dispersal events hide the early origin and induce a lack of genetic structure of the mossEcology and evolution · 2020Article
- Rabies virus diversification in aerial and terrestrial mammals.Genetics and molecular biology · 2020Article
- Tbx2a Modulates Switching of RH2 and LWS Opsin Gene Expression.Molecular biology and evolution · 2020Article
- Bacillus subtilis EA-CB0575 genome reveals clues for plant growth promotion and potential for sustainable agriculture.Functional & integrative genomics · 2020Article
- A new phylogenetic protocol: dealing with model misspecification and confirmation bias in molecular phylogenetics.NAR genomics and bioinformatics · 2020Article
- Variation in the Slimy Salamander (Plethodon spp.) Skin and Gut-Microbial Assemblages Is Explained by Geographic Distance and Host Affinity.Microbial ecology · 2020Article
- Article
13 more citing papers are in PubMed but not listed here.
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Authors and funding
3 authors.
Funding
No grant is acknowledged in the PubMed record.
Abstract
We introduce molecularevolution.org, a publicly available gateway for high-throughput, maximum-likelihood phylogenetic analysis powered by grid computing. The gateway features a garli 2.0 web service that enables a user to quickly and easily submit thousands of maximum likelihood tree searches or bootstrap searches that are executed in parallel on distributed computing resources. The garli web service allows one to easily specify partitioned substitution models using a graphical interface, and it performs sophisticated post-processing of phylogenetic results. Although the garli web service has been used by the research community for over three years, here we formally announce the availability of the service, describe its capabilities, highlight new features and recent improvements, and provide details about how the grid system efficiently delivers high-quality phylogenetic results.
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