Evidence map›Paper›PMID 24788869›Full record

ArticlePloS one2014

Host control of symbiont natural product chemistry in cryptic populations of the tunicate Lissoclinum patella.

Jason C Kwan, Ma Diarey B Tianero, Mohamed S Donia, Thomas P Wyche, Tim S Bugni, Eric W Schmidt

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
2.9field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 25 citations in OpenAlex.

  1. Animal Microbiomes as a Source of Novel Antibiotic-Producing Strains.International journal of molecular sciences · 2023
    Review
  2. Review
  3. Article
  4. Article
  5. Review
  6. Review
  7. Comparative Genomics of Marine Sponge-DerivedFrontiers in microbiology · 2019
    Article
  8. Review
  9. Origin of Chemical Diversity in Prochloron-Tunicate Symbiosis.Applied and environmental microbiology · 2016
    Article
  10. Review
  11. Article
  12. Article
  13. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Jason C KwanDepartment of Medicinal Chemistry, University of Utah, Salt Lake City, Utah, United States of America.
Ma Diarey B TianeroDepartment of Medicinal Chemistry, University of Utah, Salt Lake City, Utah, United States of America.
Mohamed S DoniaDepartment of Medicinal Chemistry, University of Utah, Salt Lake City, Utah, United States of America.
Thomas P WychePharmaceutical Sciences Division, University of Wisconsin-Madison, Madison, Wisconsin, United States of America.
Tim S BugniPharmaceutical Sciences Division, University of Wisconsin-Madison, Madison, Wisconsin, United States of America.
Eric W SchmidtDepartment of Medicinal Chemistry, University of Utah, Salt Lake City, Utah, United States of America.
University of Utah · USUniversity of Wisconsin–Madison · US

Funding

Rapid Screening and Dereplication of Marine Symbiotic Natural ProductsR01GM092009 · NIGMS · UNIVERSITY OF UTAH · PI SCHMIDT, ERIC W · 2010 to 2012
$1.1M
NIGMS NIH HHS GM092009NIGMS NIH HHS R01 GM092009
6 · The paper itself

Abstract

Natural products (secondary metabolites) found in marine invertebrates are often thought to be produced by resident symbiotic bacteria, and these products appear to play a major role in the symbiotic interaction of bacteria and their hosts. In these animals, there is extensive variation, both in chemistry and in the symbiotic bacteria that produce them. Here, we sought to answer the question of what factors underlie chemical variation in the ocean. As a model, we investigated the colonial tunicate Lissoclinum patella because of its rich and varied chemistry and its broad geographic range. We sequenced mitochondrial cytochrome c oxidase 1 (COXI) genes, and found that animals classified as L. patella fall into three phylogenetic groups that may encompass several cryptic species. The presence of individual natural products followed the phylogenetic relationship of the host animals, even though the compounds are produced by symbiotic bacteria that do not follow host phylogeny. In sum, we show that cryptic populations of animals underlie the observed chemical diversity, suggesting that the host controls selection for particular secondary metabolite pathways. These results imply novel approaches to obtain chemical diversity from the oceans, and also demonstrate that the diversity of marine natural products may be greatly impacted by cryptic local extinctions.

Indexed as

Host-Pathogen InteractionsSymbiosisAnimalsBacteriaBase SequenceBiological ProductsElectron Transport Complex IVMitochondriaPhylogenyRNA, Ribosomal, 18SUrochordataBiological ProductsElectron Transport Complex IVRNA, Ribosomal, 18S

Identifiers

PMID24788869
PMCPMC4008419
OpenAlexW2006125907

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.