Evidence map›Paper›PMID 24788730›Full record

ArticlePloS one2014

Association of a TNIP1 polymorphism with Vogt-Koyanagi-Harada syndrome but not with ocular Behcet's disease in Han Chinese.

Yanyun Shi, Yading Jia, Shengping Hou, Jing Fang, Yan Zhou, Aize Kijlstra, Peizeng Yang

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.9field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 8 citations in OpenAlex.

  1. Review
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  3. Journal of clinical medicine · 2019
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 2 countries.

Yanyun ShiThe First Affiliated Hospital of Chongqing Medical University, Chongqing, China.
Yading JiaShanxi Eye Hospital, Taiyuan, Shanxi, China.
Shengping HouThe First Affiliated Hospital of Chongqing Medical University, Chongqing, China; Chongqing Eye Institute, Chongqing, China; Chongqing Key Laboratory of Ophthalmology, Chongqing, China.
Jing FangThe First Affiliated Hospital of Chongqing Medical University, Chongqing, China.
Yan ZhouThe First Affiliated Hospital of Chongqing Medical University, Chongqing, China.
Aize KijlstraUniversity Eye Clinic Maastricht, Maastricht, Limburg, The Netherlands.
Peizeng YangThe First Affiliated Hospital of Chongqing Medical University, Chongqing, China; Chongqing Eye Institute, Chongqing, China; Chongqing Key Laboratory of Ophthalmology, Chongqing, China.
Chongqing Medical University · CNFirst Affiliated Hospital of Chongqing Medical University · CNMaastricht University · NLShanxi Eye Hospital · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

objectivesThe aim of the study was to investigate the association of TNFα-induced protein 3 interacting with protein 1 (TNIP1) gene polymorphisms with Vogt-Koyanagi-Harada (VKH) syndrome and Behcet's disease (BD) in a Han Chinese population.

methodsA total of 656 BD patients, 961 VKH syndrome patients and 1534 healthy controls were included in this two-stage case control study. Seven SNPs, including rs17728338, rs7708392, rs10036748, rs3762999, rs999556, rs4958881 and rs3792783, belonging to TNIP1 were genotyped and analyzed by the polymerase chain reaction-restriction fragment length polymorphism (PCR-RFLP) method. The data were analyzed by using the χ2 or Fisher's exact test and corrected for multiple comparisons by the Bonferroni method.

resultsA significantly increased frequency of the GG genotype and a decreased frequency of the AG genotype of rs17728338 were found in VKH patients (Pc = 0.038 OR = 1.934, 95% CI  = 1.438 ∼ 2.601). No significant difference was noted in allele or genotype frequencies of rs7708392, rs10036748, rs3762999, rs999556, rs4958881 and rs3792783, between VKH patients and healthy controls (Pc>0.05). No significant difference was noted in allele or genotype frequencies of the tested 7 SNPs between BD patients and healthy controls. Analysis of extraocular clinical findings, did not reveal an association of the TNIP1 gene polymorphisms with BD or VKH syndrome subgroups.

conclusionA TNIP1 polymorphism may be a risk factor for VKH syndrome in Han Chinese.

Indexed as

Polymorphism, Single NucleotideAdultAsian PeopleBehcet SyndromeCase-Control StudiesDNA-Binding ProteinsEthnicityFemaleGene FrequencyGenetic Predisposition to DiseaseHumansMaleUveomeningoencephalitic SyndromeDNA-Binding ProteinsTNIP1 protein, human

Identifiers

PMID24788730
PMCPMC4008420
OpenAlexW2017892799

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.