Evidence map›Paper›PMID 24788412›Full record

ArticlePloS one2014

Analyses of the temporal dynamics of fungal communities colonizing the healthy wood tissues of esca leaf-symptomatic and asymptomatic vines.

Emilie Bruez, Jessica Vallance, Jonathan Gerbore, Pascal Lecomte, Jean-Pierre Da Costa, Lucia Guerin-Dubrana, Patrice Rey

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 46 papers.

0numbers the graph read from it
0cells of the map it votes in
46citing papers in PubMed
3.2field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

46 citing papers in PubMed, 132 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Higher Virulence ofPlants (Basel, Switzerland) · 2023
    Article
  12. Review
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Emilie BruezUniversité de Bordeaux, ISVV, UMR1065 Santé et Agroécologie du Vignoble (SAVE), Bordeaux Sciences Agro, Villenave d'Ornon, France; INRA, ISVV, UMR1065 SAVE, Villenave d'Ornon, France.
Jessica VallanceUniversité de Bordeaux, ISVV, UMR1065 Santé et Agroécologie du Vignoble (SAVE), Bordeaux Sciences Agro, Villenave d'Ornon, France; INRA, ISVV, UMR1065 SAVE, Villenave d'Ornon, France.
Jonathan GerboreUniversité de Bordeaux, ISVV, UMR1065 Santé et Agroécologie du Vignoble (SAVE), Bordeaux Sciences Agro, Villenave d'Ornon, France; INRA, ISVV, UMR1065 SAVE, Villenave d'Ornon, France; BIOVITIS, Saint Etienne de Chomeil, France.
Pascal LecomteUniversité de Bordeaux, ISVV, UMR1065 Santé et Agroécologie du Vignoble (SAVE), Bordeaux Sciences Agro, Villenave d'Ornon, France; INRA, ISVV, UMR1065 SAVE, Villenave d'Ornon, France.
Jean-Pierre Da CostaIMS, Université de Bordeaux, Bordeaux Sciences Agro, Talence, France.
Lucia Guerin-DubranaUniversité de Bordeaux, ISVV, UMR1065 Santé et Agroécologie du Vignoble (SAVE), Bordeaux Sciences Agro, Villenave d'Ornon, France; INRA, ISVV, UMR1065 SAVE, Villenave d'Ornon, France.
Patrice ReyUniversité de Bordeaux, ISVV, UMR1065 Santé et Agroécologie du Vignoble (SAVE), Bordeaux Sciences Agro, Villenave d'Ornon, France; INRA, ISVV, UMR1065 SAVE, Villenave d'Ornon, France.
Santé et Agroécologie du Vignoble · FRUniversité de Bordeaux · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Esca, a Grapevine Trunk Disease (GTD), is of major concern for viticulture worldwide. Our study compares the fungal communities that inhabit the wood tissues of vines that expressed or not foliar esca-symptoms. The trunk and rootstock tissues were apparently healthy, whether the 10 year-old plants were symptomatic or not. The only difference was in the cordon, which contained white rot, a typical form of esca, in 79% of symptomatic plants. Observations over a period of one year using a fingerprint method, Single Strand Conformation Polymorphism (SSCP), and the ITS-DNA sequencing of cultivable fungi, showed that shifts occurred in the fungal communities colonizing the healthy wood tissues. However, whatever the sampling time, spring, summer, autumn or winter, the fungi colonizing the healthy tissues of asymptomatic or symptomatic plants were not significantly different. Forty-eight genera were isolated, with species of Hypocreaceae and Botryosphaeriaceae being the most abundant species. Diverse fungal assemblages, made up of potentially plant-pathogenic and -protective fungi, colonized these non-necrotic tissues. Some fungi, possibly involved in GTD, inhabited the non-necrotic wood of young plants, but no increase in necrosis areas was observed over the one-year period.

Indexed as

MicrobiotaBiodiversityDNA, FungalFungiHaplotypesPlant DiseasesPlant LeavesVitisWoodDNA, Fungal

Identifiers

PMID24788412
PMCPMC4006835
OpenAlexW2033503697

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.