Evidence map›Paper›PMID 24787650›Full record

ArticlePloS one2014

Protein thermodynamics can be predicted directly from biological growth rates.

Ross Corkrey, Tom A McMeekin, John P Bowman, David A Ratkowsky, June Olley, Tom Ross

Abstract read
In one paragraph

Article in PloS one, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
  4. Phytoplankton thermal responses adapt in the absence of hard thermodynamic constraints.Evolution; international journal of organic evolution · 2020
    Article
  5. Article
  6. Article
  7. Thermosensitivity of growth is determined by chaperone-mediated proteome reallocation.Proceedings of the National Academy of Sciences of the United States of America · 2017
    Article
  8. Article
  9. Article
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Ross CorkreyTasmanian Institute of Agriculture/School of Agricultural Science, University of Tasmania, Hobart, Tasmania, Australia.
Tom A McMeekinTasmanian Institute of Agriculture/School of Agricultural Science, University of Tasmania, Hobart, Tasmania, Australia.
John P BowmanTasmanian Institute of Agriculture/School of Agricultural Science, University of Tasmania, Hobart, Tasmania, Australia.
David A RatkowskyTasmanian Institute of Agriculture/School of Agricultural Science, University of Tasmania, Hobart, Tasmania, Australia.
June OlleyTasmanian Institute of Agriculture/School of Agricultural Science, University of Tasmania, Hobart, Tasmania, Australia.
Tom RossTasmanian Institute of Agriculture/School of Agricultural Science, University of Tasmania, Hobart, Tasmania, Australia.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Life on Earth is capable of growing from temperatures well below freezing to above the boiling point of water, with some organisms preferring cooler and others hotter conditions. The growth rate of each organism ultimately depends on its intracellular chemical reactions. Here we show that a thermodynamic model based on a single, rate-limiting, enzyme-catalysed reaction accurately describes population growth rates in 230 diverse strains of unicellular and multicellular organisms. Collectively these represent all three domains of life, ranging from psychrophilic to hyperthermophilic, and including the highest temperature so far observed for growth (122 °C). The results provide credible estimates of thermodynamic properties of proteins and obtain, purely from organism intrinsic growth rate data, relationships between parameters previously identified experimentally, thus bridging a gap between biochemistry and whole organism biology. We find that growth rates of both unicellular and multicellular life forms can be described by the same temperature dependence model. The model results provide strong support for a single highly-conserved reaction present in the last universal common ancestor (LUCA). This is remarkable in that it means that the growth rate dependence on temperature of unicellular and multicellular life forms that evolved over geological time spans can be explained by the same model.

Indexed as

Bayes TheoremModels, BiologicalArchaeaBacteriaEnzymesEukaryotaTemperatureThermodynamicsEnzymes

Identifiers

PMID24787650
PMCPMC4006894

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.