Evidence map›Paper›PMID 24787569›Full record

ArticleInvestigative ophthalmology & visual science2014

Human trabecular meshwork sphingolipid and ceramide profiles and potential latent fungal commensalism.

Ayman J Aljohani, Genea Edwards, Yenifer Guerra, Sander Dubovy, Darlene Miller, Richard K Lee, Sanjoy K Bhattacharya

Open access · hybridAbstract read
In one paragraph

Article in Investigative ophthalmology & visual science, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
0.9field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 20 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Endogenous ocular lipids as potential modulators of intraocular pressure.Journal of cellular and molecular medicine · 2020
    Article
  6. Article
  7. Role of Bioactive Sphingolipids in Inflammation and Eye Diseases.Advances in experimental medicine and biology · 2019
    Article
  8. Review
  9. Article
  10. Shotgun Sphingolipid Analysis of Human Aqueous Humor.Methods in molecular biology (Clifton, N.J.) · 2018
    Article
  11. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Ayman J AljohaniBascom Palmer Eye Institute, University of Miami, Miami, Florida, United States.
Genea EdwardsBascom Palmer Eye Institute, University of Miami, Miami, Florida, United States.
Yenifer GuerraBascom Palmer Eye Institute, University of Miami, Miami, Florida, United States.
Sander DubovyBascom Palmer Eye Institute, University of Miami, Miami, Florida, United States.
Darlene MillerBascom Palmer Eye Institute, University of Miami, Miami, Florida, United States.
Richard K LeeBascom Palmer Eye Institute, University of Miami, Miami, Florida, United States.
Sanjoy K BhattacharyaBascom Palmer Eye Institute, University of Miami, Miami, Florida, United States.
Miami Dermatology and Laser Institute · USUniversity of Miami · US

Funding

Shared Equipment ModuleP30EY014801 · NEI · UNIVERSITY OF MIAMI SCHOOL OF MEDICINE · PI Victor L Perez · 2004 to 2026
$12.2M
TRABECULAR MESHWORK PROTEINS IN GLAUCOMAR01EY016112 · NEI · UNIVERSITY OF MIAMI SCHOOL OF MEDICINE · PI BHATTACHARYA, SANJOY K · 2006 to 2016
$3.7M
University of Miami Computational Ocular Genomics Training ProgramT32EY023194 · NEI · UNIVERSITY OF MIAMI SCHOOL OF MEDICINE · PI SCOTT, WILLIAM K · 2013 to 2017
$661k
NEI NIH HHS EY016112NEI NIH HHS EY016112S1NEI NIH HHS P30 EY014801NEI NIH HHS P30-EY14801NEI NIH HHS R01 EY016112NEI NIH HHS T32 EY023194NEI NIH HHS T32EY023194-01
6 · The paper itself

Abstract

purposeWe determined the profiles of sphingomyelin, sphingoid base, sphingoid base-1-phosphate, and ceramide, and their quantitative differences between control and glaucomatous trabecular meshwork (TM) derived from human donors.

methodsControl and primary open angle glaucoma (POAG) TM samples were collected from cadaver donors. In addition, POAG TM surgical specimens also were procured. Lipid extraction was performed using suitable modifications of the Bligh and Dyer method. Protein concentrations were determined using Bradford's method. Lipids, identified using standardized class-specific lipid mass spectrometry, were quantified using a two-step ratiometric process. Gomori methenamine silver (GMS) staining was performed for detection of presence of Fusarium in the anterior eye tissue sections. PCR analyses were performed for detection of Fusarium species in the donor TM samples.

resultsSeveral species of sphingomyelin, sphingoid base, sphingoid base-1-phosphate, and ceramide were common between control and POAG TM. Only a subset of species in some of these classes were identified uniquely either in controls or in POAG TM. Several lipid species of fungal origin (many from Fungi imperfecti, Fusarium species) were found to be common between control and POAG TM. The GMS staining and PCR analyses showed presence of DNA belonging to Fusarium species suggesting latent commensalism.

conclusionsMost sphingolipids and ceramides (except a few unique to a specific donor TM group) were found to be common in the control and POAG TM. Latent commensalism by Fusarium was suggested by identification of Fusarium-specific lipids, which was supported further by PCR amplification and sequencing of DNA.

Indexed as

SymbiosisAgedCadaverCeramidesDNA, FungalEye Infections, FungalFemaleFusariosisFusariumGlaucoma, Open-AngleHumansMaleMass SpectrometryMiddle AgedPolymerase Chain ReactionSphingolipidsCeramidesDNA, FungalSphingolipidsceramideglaucomalipidomicssphingolipidtrabecular meshwork

Identifiers

PMID24787569
PMCPMC4046385
OpenAlexW2015972710

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.