Evidence map›Paper›PMID 24787274›Full record

ArticleJournal of immunological methods2014

Establishment and maintenance of a PBMC repository for functional cellular studies in support of clinical vaccine trials.

Anna Sambor, Ambrosia Garcia, Mark Berrong, Joy Pickeral, Sara Brown, Wes Rountree, Ana Sanchez, Justin Pollara, Nicole Frahm, Sarah Keinonen and 9 more

Abstract read
In one paragraph

Article in Journal of immunological methods, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed.

  1. Trial
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

19 authors.

Anna SamborFoundation for National Institutes of Health, Bethesda, MD, USA.
Ambrosia GarciaDuke Human Vaccine Institute, Duke University, Durham, NC, USA; Duke University Medical Center, Durham, NC, USA.
Mark BerrongDuke University Medical Center, Durham, NC, USA.
Joy PickeralDuke University Medical Center, Durham, NC, USA.
Sara BrownDuke Human Vaccine Institute, Duke University, Durham, NC, USA.
Wes RountreeDuke Human Vaccine Institute, Duke University, Durham, NC, USA; Duke University Medical Center, Durham, NC, USA.
Ana SanchezDuke Human Vaccine Institute, Duke University, Durham, NC, USA; Duke University Medical Center, Durham, NC, USA.
Justin PollaraDuke University Medical Center, Durham, NC, USA.
Nicole FrahmFred Hutchinson Cancer Research Center, Seattle, WA, USA.
Sarah KeinonenDuke Human Vaccine Institute, Duke University, Durham, NC, USA; Duke University Medical Center, Durham, NC, USA.
Gustavo H KijakViral Genetics Section, US Military HIV Research Program, Henry M Jackson Foundation for the Advancement of Military Medicine, Walter Reed Army Institute of Research, Silver Spring, MD, USA.
Mario RoedererVaccine Research Center, NIAID, NIH, Bethesda, MD, USA.
Gail LevineFoundation for National Institutes of Health, Bethesda, MD, USA.
M Patricia D'SouzaDivision of AIDS, NIAD, NIH, Rockville, MD, USA.
Maria JaimesBecton Dickinson, San Jose, CA, USA.
Richard KoupVaccine Research Center, NIAID, NIH, Bethesda, MD, USA.
Thomas DennyDuke Human Vaccine Institute, Duke University, Durham, NC, USA; Duke University Medical Center, Durham, NC, USA.
Josephine CoxInternational AIDS Vaccine Initiative, New York, NY, USA.
Guido FerrariDuke Human Vaccine Institute, Duke University, Durham, NC, USA; Duke University Medical Center, Durham, NC, USA. Electronic address: gflmp@duke.edu.

Funding

Testing of Blood Samples for Immune Response and Vaccine ResearchZIAAI005073 · NIAID · NATIONAL INSTITUTE OF ALLERGY AND INFECTIOUS DISEASES · PI KOUP, RICHARD A · 2009 to 2025
$23.4M
Non-Human Primate CoreZICAI005103 · NIAID · NATIONAL INSTITUTE OF ALLERGY AND INFECTIOUS DISEASES · PI FOULDS, KATHRYN · 2009 to 2025
$22.7M
Immunology CoreZICAI005124 · NIAID · NATIONAL INSTITUTE OF ALLERGY AND INFECTIOUS DISEASES · PI KOUP, RICHARD A · 2013 to 2016
$6.4M
NIAID NIH HHS HHSN272201000045C
6 · The paper itself

Abstract

A large repository of cryopreserved peripheral blood mononuclear cells (PBMCs) samples was created to provide laboratories testing the specimens from human immunodeficiency virus-1 (HIV-1) vaccine clinical trials the material for assay development, optimization, and validation. One hundred thirty-one PBMC samples were collected using leukapheresis procedure between 2007 and 2013 by the Comprehensive T cell Vaccine Immune Monitoring Consortium core repository. The donors included 83 human immunodeficiency virus-1 (HIV-1) seronegative and 32 HIV-1 seropositive subjects. The samples were extensively characterized for the ability of T cell subsets to respond to recall viral antigens including cytomegalovirus, Epstein-Barr virus, influenza virus, and HIV-1 using Interferon-gamma (IFN-γ) enzyme linked immunospot (ELISpot) and IFN-γ/interleukin 2 (IL-2) intracellular cytokine staining (ICS) assays. A subset of samples was evaluated over time to determine the integrity of the cryopreserved samples in relation to recovery, viability, and functionality. The principal results of our study demonstrate that viable and functional cells were consistently recovered from the cryopreserved samples. Therefore, we determined that this repository of large size cryopreserved cellular samples constitutes a unique resource for laboratories that are involved in optimization and validation of assays to evaluate T, B, and NK cellular functions in the context of clinical trials.

Indexed as

AdolescentAdultAIDS VaccinesBiological Specimen BanksBiomarkersCell SurvivalCooperative BehaviorCryopreservationCytokinesEnzyme-Linked Immunospot AssayFemaleGuideline AdherenceHIV-1HIV InfectionsHumansImmunologic TestsAIDS VaccinesBiomarkersCytokinesCryopreservationPeripheral blood mononuclear cellsRepository

Identifiers

PMID24787274
PMCPMC4152919

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.