Evidence map›Paper›PMID 24787123›Full record

ArticleBiosensors & bioelectronics2014

An ion-exchange nanomembrane sensor for detection of nucleic acids using a surface charge inversion phenomenon.

Satyajyoti Senapati, Zdenek Slouka, Sunny S Shah, Susanta K Behura, Zonggao Shi, M Sharon Stack, David W Severson, Hsueh-Chia Chang

Open access · greenAbstract read
In one paragraph

Article in Biosensors & bioelectronics, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 30 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
30citing papers in PubMed, 1 pooled it
2.7field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

30 citing papers in PubMed, 1 synthesis or guideline pooled it, 76 citations in OpenAlex.

  1. Pooled it
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  12. Semi-Continuous Desalination and Concentration of Small-Volume Samples.International journal of molecular sciences · 2021
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  15. Transitions and Instabilities in Imperfect Ion-Selective Membranes.International journal of molecular sciences · 2020
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

Satyajyoti SenapatiDepartment of Chemical and Biomolecular Engineering, University of Notre Dame, Notre Dame, IN 46556, USA; Advanced Diagnostics & Therapeutics, University of Notre Dame, Notre Dame, IN 46556, USA.
Zdenek SloukaDepartment of Chemical and Biomolecular Engineering, University of Notre Dame, Notre Dame, IN 46556, USA.
Sunny S ShahAdvanced Diagnostics & Therapeutics, University of Notre Dame, Notre Dame, IN 46556, USA.
Susanta K BehuraDepartment of Biological Sciences and Eck Institute for Global Health, University of Notre Dame, Notre Dame, IN 46556, USA.
Zonggao ShiDepartment of Chemistry and Biochemistry, University of Notre Dame, Notre Dame, IN 46556, USA; Harper Cancer Research Institute, University of Notre Dame, Notre Dame, IN 46556, USA.
M Sharon StackAdvanced Diagnostics & Therapeutics, University of Notre Dame, Notre Dame, IN 46556, USA; Department of Chemistry and Biochemistry, University of Notre Dame, Notre Dame, IN 46556, USA; Harper Cancer Research Institute, University of Notre Dame, Notre Dame, IN 46556, USA.
David W SeversonAdvanced Diagnostics & Therapeutics, University of Notre Dame, Notre Dame, IN 46556, USA; Department of Biological Sciences and Eck Institute for Global Health, University of Notre Dame, Notre Dame, IN 46556, USA.
Hsueh-Chia ChangDepartment of Chemical and Biomolecular Engineering, University of Notre Dame, Notre Dame, IN 46556, USA; Advanced Diagnostics & Therapeutics, University of Notre Dame, Notre Dame, IN 46556, USA; Harper Cancer Research Institute, University of Notre Dame, Notre Dame, IN 46556, USA. Electronic address: hchang@nd.edu.
University of Notre Dame · US

Funding

Receptor Cross-Talk in Early Metastatic DisseminationR01CA109545 · NCI · UNIVERSITY OF NOTRE DAME · PI STACK, MARY SHARON · 2006 to 2022
$4.3M
NCI NIH HHS R01 CA109545
6 · The paper itself

Abstract

We present a novel low-cost biosensor for rapid, sensitive and selective detection of nucleic acids based on an ionic diode feature of an anion exchange nanoporous membrane under DC bias. The ionic diode feature is associated with external surface charge inversion on the positively charged anion exchange nanomembrane upon hybridization of negatively charged nucleic acid molecules to single-stranded oligoprobes functionalized on the membrane surface resulting in the formation of a cation selective monolayer. The resulting bipolar membrane causes a transition from electroconvection-controlled to water-splitting controlled ion conductance, with a large ion current signature that can be used to accurately quantify the hybridized nucleic acids. The platform is capable of distinguishing two base-pair mismatches in a 22-base pairing segment of microRNAs associated with oral cancer, as well as serotype-specific detection of dengue virus. We also show the sensor' capability to selectively capture target nucleic acids from a heterogeneous mixture. The limit of detection is 1 pM for short 27 base target molecules in a 15-min assay. Similar hybridization results are shown for short DNA molecules as well as RNAs from Brucella and Escherichia coli. The versatility and simplicity of this low-cost biosensor should enable point-of-care diagnostics in food, medical and environmental safety markets.

Indexed as

Membranes, ArtificialBase SequenceBiosensing TechniquesChromatography, Ion ExchangeConductometryDNADNA Mutational AnalysisEquipment DesignEquipment Failure AnalysisMolecular Sequence DataNanoporesNanotechnologyNucleic AcidsReproducibility of ResultsSensitivity and SpecificitySequence Analysis, DNADNAMembranes, ArtificialNucleic AcidsBiosensingCharge inversionDNA/RNAElectrokineticsNanoporous membrane

Identifiers

PMID24787123
PMCPMC4445831
OpenAlexW2158132314

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.