Evidence map›Paper›PMID 24781197›Full record

ArticlePlant physiology2014

Glucan, Water Dikinase Exerts Little Control over Starch Degradation in Arabidopsis Leaves at Night.

Alastair W Skeffington, Alexander Graf, Zane Duxbury, Wilhelm Gruissem, Alison M Smith

Open access · hybridAbstract read
In one paragraph

Article in Plant physiology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 38 papers.

0numbers the graph read from it
0cells of the map it votes in
38citing papers in PubMed
11.0field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

38 citing papers in PubMed, 75 citations in OpenAlex.

  1. Review
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  15. Review
  16. Starch Trek: The Search for Yield.Frontiers in plant science · 2018
    Review
  17. Redox Regulation of Starch Metabolism.Frontiers in plant science · 2018
    Article
  18. Arabidopsis β-Amylase2 Is a KPlant physiology · 2017
    Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 2 countries.

Alastair W SkeffingtonJohn Innes Centre, Norwich NR4 7UH, United Kingdom (A.W.S., A.G., Z.D., A.M.S.); andDepartment of Biology, Eidgenössisch Technische Hochschule Zürich, CH-8092 Zurich, Switzerland (A.G., W.G.).
Alexander GrafJohn Innes Centre, Norwich NR4 7UH, United Kingdom (A.W.S., A.G., Z.D., A.M.S.); andDepartment of Biology, Eidgenössisch Technische Hochschule Zürich, CH-8092 Zurich, Switzerland (A.G., W.G.).
Zane DuxburyJohn Innes Centre, Norwich NR4 7UH, United Kingdom (A.W.S., A.G., Z.D., A.M.S.); andDepartment of Biology, Eidgenössisch Technische Hochschule Zürich, CH-8092 Zurich, Switzerland (A.G., W.G.).
Wilhelm GruissemJohn Innes Centre, Norwich NR4 7UH, United Kingdom (A.W.S., A.G., Z.D., A.M.S.); andDepartment of Biology, Eidgenössisch Technische Hochschule Zürich, CH-8092 Zurich, Switzerland (A.G., W.G.).
Alison M SmithJohn Innes Centre, Norwich NR4 7UH, United Kingdom (A.W.S., A.G., Z.D., A.M.S.); andDepartment of Biology, Eidgenössisch Technische Hochschule Zürich, CH-8092 Zurich, Switzerland (A.G., W.G.) alison.smith@jic.ac.uk.
John Innes Centre · GBBoard of the Swiss Federal Institutes of Technology · CH

Funding

Biotechnology and Biological Sciences Research Council BBS/B/11877Biotechnology and Biological Sciences Research Council BBS/E/J/00000020Biotechnology and Biological Sciences Research Council BBS/E/J/000CA418
6 · The paper itself

Abstract

The first step on the pathway of starch degradation in Arabidopsis (Arabidopsis thaliana) leaves at night is the phosphorylation of starch polymers, catalyzed by glucan, water dikinase (GWD). It has been suggested that GWD is important for the control of starch degradation, because its transcript levels undergo strong diel fluctuations, its activity is subject to redox regulation in vitro, and starch degradation is strongly decreased in gwd mutant plants. To test this suggestion, we analyzed changes in GWD protein abundance in relation to starch levels in wild-type plants, in transgenic plants in which GWD transcripts were strongly reduced by induction of RNA interference, and in transgenic plants overexpressing GWD. We found that GWD protein levels do not vary over the diel cycle and that the protein has a half-life of 2 d. Overexpression of GWD does not accelerate starch degradation in leaves, and starch degradation is not inhibited until GWD levels are reduced by 70%. Surprisingly, this degree of reduction also inhibits starch synthesis in the light. To discover the importance of redox regulation, we generated transgenic plants expressing constitutively active GWD. These plants retained normal control of degradation. We conclude that GWD exerts only a low level of control over starch degradation in Arabidopsis leaves.

Identifiers

PMID24781197
PMCPMC4044853
OpenAlexW2028558767

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.