Evidence map›Paper›PMID 24781028›Full record

ArticleParasitology research2014

Quantification of viable Giardia cysts and Cryptosporidium oocysts in wastewater using propidium monoazide quantitative real-time PCR.

José L Alonso, Inmaculada Amorós, Rebecca A Guy

Abstract read
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Article in Parasitology research, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed.

  1. Review
  2. Optimization ofJournal of environmental engineering (New York, N.Y.) · 2025
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  3. Molecular Identification of ProtozoanLife (Basel, Switzerland) · 2022
    Article
  4. Hastening Progress inMicroorganisms · 2022
    Article
  5. Detection ofMicroorganisms · 2022
    Review
  6. Article
  7. Article
  8. Article
  9. The occurrence ofGastroenterology and hepatology from bed to bench · 2019
    Article
  10. Article
  11. Review
  12. Article
  13. Article
  14. Article
  15. Article
  16. Review
  17. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

José L AlonsoInstituto Universitario de Ingeniería del Agua y Medio Ambiente, Universitat Politècnica de València, Ciudad Politécnica de la Innovación, Ed. 8G, Acceso D, Planta 2, Camino de Vera s/n, 46022, Valencia, Spain, jalonso@ihdr.upv.es.
Inmaculada Amorós
Rebecca A Guy

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Real-time PCR (qPCR) is a rapid tool to quantify pathogens in the aquatic environment; however, it quantifies all pathogens, including both viable and nonviable. Propidium monoazide (PMA) is a membrane-impairment dye that penetrates only membrane-damaged cells. Once inside the cell, PMA is covalently cross-linked to DNA through light photoactivation, and PCR amplification is strongly inhibited. The goal of this study was to evaluate PMA-qPCR assays for rapid quantification of viable and heat-treated Giardia cysts and Cryptosporidium oocysts in wastewater. We observed a reduction in detection of heat-treated Giardia duodenalis cysts of 83.2, 89.9, 98.2, or 97% with PMA-qPCR assays amplifying a 75 base-pair (bp) β-giardin target, 77-bp triosephosphate isomerase (tpi), 133-bp glutamate dehydrogenase (GDH), and 143-bp β-giardin gene target, respectively. Thus, the exclusion of dead cysts was more effective when qPCR assays that produced larger amplicons were used. The PMA treatment of Cryptosporidium oocysts plus/minus heat treatment abolished the fluorescent signal for dead oocysts with a PMA-qPCR assay amplifying a Cryptosporidium parvum (150-bp) oocyst wall protein (COWP) gene. The PMA-qPCR 143-bp β-giardin assay for Giardia and the PMA-qPCR 150-bp COWP assay for Cryptosporidium accurately quantified live oo(cysts), and failed to detect dead oo(cysts), when phosphate-buffered saline and tertiary effluent wastewater were spiked with concentrations of 10(3) or 10(2) dead oo(cysts), respectively. Therefore, these assays are suitable for the detection of viable parasites that are typically present in tertiary wastewater effluents at concentrations of <10(3) oo(cysts)/l and can provide rapid risk assessments of environmental water.

Indexed as

AnimalsAzidesColoring AgentsCryptosporidium parvumCytoskeletal ProteinsEnvironmental MonitoringFluorescenceGiardia lambliaGlutamate DehydrogenaseOocystsPropidiumProtozoan ProteinsReal-Time Polymerase Chain ReactionTriose-Phosphate IsomeraseWastewaterAzidesColoring AgentsCytoskeletal Proteinsgiardin protein, Giardia lambliaGlutamate DehydrogenasePropidiumpropidium monoazideProtozoan ProteinsTriose-Phosphate IsomeraseWastewater

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.