Evidence map›Paper›PMID 24780628›Full record

ArticleDevelopmental biology2014

Foxi3 is necessary for the induction of the chick otic placode in response to FGF signaling.

Safia B Khatri, Renée K Edlund, Andrew K Groves

Abstract read
In one paragraph

Article in Developmental biology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed
2.1field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed, 44 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Sensory cells in tunicates: insights into mechanoreceptor evolution.Frontiers in cell and developmental biology · 2024
    Review
  5. Article
  6. The spontaneous mouse mutant low set ears (Lse) is caused by tandem duplication of Fgf3 and Fgf4.Mammalian genome : official journal of the International Mammalian Genome Society · 2023
    Article
  7. Article
  8. Article
  9. Comparative assessment of Fgf's diverse roles in inner ear development: A zebrafish perspective.Developmental dynamics : an official publication of the American Association of Anatomists · 2021
    Review
  10. Review
  11. Review
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. A Review ofFrontiers in cell and developmental biology · 2018
    Article
  18. Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Safia B KhatriDepartment of Neuroscience, Baylor College of Medicine, BCM295, 1 Baylor Plaza, Houston, TX 77030, United States.
Renée K EdlundProgram in Developmental Biology, Baylor College of Medicine, BCM295, 1 Baylor Plaza, Houston, TX 77030, United States.
Andrew K GrovesDepartment of Neuroscience, Baylor College of Medicine, BCM295, 1 Baylor Plaza, Houston, TX 77030, United States; Department of Molecular and Human Genetics and Baylor College of Medicine, BCM295, 1 Baylor Plaza, Houston, TX 77030, United States; Program in Developmental Biology, Baylor College of Medicine, BCM295, 1 Baylor Plaza, Houston, TX 77030, United States. Electronic address: akgroves@bcm.edu.
Baylor College of Medicine · US

Funding

Genetic Regulation of Inner, Middle and Outer Ear DevelopmentR01DC013072 · NIDCD · WASHINGTON UNIVERSITY · PI GROVES, ANDREW K · 2013 to 2025
$5.1M
Cellular and Molecular Mechanisms of Otic Placode InductionR01DC004675 · NIDCD · HOUSE RESEARCH INSTITUTE · PI GROVES, ANDREW K · 2001 to 2011
$3.3M
Developmental Biology Training ProgramT32HD055200 · NICHD · BAYLOR COLLEGE OF MEDICINE · PI BELLEN, HUGO J · 2007 to 2011
$1.3M
The role of Foxi3 in inner ear developmentF32DC011672 · NIDCD · BAYLOR COLLEGE OF MEDICINE · PI KHATRI, SAFIA BANO · 2011 to 2012
$105k
NICHD NIH HHS T32 HD055200NIDCD NIH HHS F32 DC011672NIDCD NIH HHS F32DC011672NIDCD NIH HHS R01 DC004675NIDCD NIH HHS R01 DC013072NIDCD NIH HHS R01DC013072
6 · The paper itself

Abstract

Vertebrate cranial sensory organs are derived from region at the border of the anterior neural plate called the pre-placodal region (PPR). The otic placode, the anlagen of the inner ear, is induced from PPR ectoderm by FGF signaling. We have previously shown that competence of embryonic ectoderm to respond to FGF signaling during otic placode induction correlates with the expression of PPR genes, but the molecular basis of this competence is poorly understood. Here, we characterize the function of a transcription factor, Foxi3 that is expressed at very early stages in the non-neural ectoderm and later in the PPR of chick embryos. Ablation experiments showed that the underlying hypoblast is necessary for the initiation of Foxi3 expression. Mis-expression of Foxi3 was sufficient to induce markers of non-neural ectoderm such as Dlx5, and the PPR such as Six1 and Eya2. Electroporation of Dlx5, or Six1 together with Eya1 also induced Foxi3, suggesting direct or indirect positive regulation between non-neural ectoderm genes and PPR genes. Knockdown of Foxi3 in chick embryos prevented the induction of otic placode markers, and was able to prevent competent cranial ectoderm from expressing otic markers in response to FGF2. In contrast, Foxi3 expression alone was not sufficient to confer competence to respond to FGF on embryonic ectoderm. Our analysis of PPR and FGF-responsive genes after Foxi3 knockdown at gastrula stages suggests it is not necessary for the expression of PPR genes at these stages, nor for the transduction of FGF signals. The early expression but late requirement for Foxi3 in ear induction suggests it may have some of the properties associated with pioneer transcription factors.

Indexed as

AnimalsChick EmbryoEarEctodermFaceFibroblast Growth FactorsForkhead Transcription FactorsGastrulaGene Expression Regulation, DevelopmentalGene Knockout TechniquesMaxillofacial DevelopmentMorpholinosNeural PlateSignal TransductionFibroblast Growth FactorsForkhead Transcription FactorsMorpholinosCompetenceFGFFoxi3InductionOtic placodePre-placodal region

Identifiers

PMID24780628
PMCPMC4070591
OpenAlexW2078309249

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.