Evidence map›Paper›PMID 24778428›Full record

ArticleThe Journal of general physiology2014

The cytoplasmic cage domain of the mechanosensitive channel MscS is a sensor of macromolecular crowding.

Ian Rowe, Andriy Anishkin, Kishore Kamaraju, Kenjiro Yoshimura, Sergei Sukharev

Open access · bronzeAbstract read
In one paragraph

Article in The Journal of general physiology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
2.4field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 47 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Article
  6. Cyclodextrins increase membrane tension and are universal activators of mechanosensitive channels.Proceedings of the National Academy of Sciences of the United States of America · 2021
    Article
  7. Review
  8. The mechanosensitive channel YbdG fromThe Journal of biological chemistry · 2019
    Article
  9. Article
  10. Article
  11. Review
  12. Article
  13. Article
  14. Microorganisms maintain crowding homeostasis.Nature reviews. Microbiology · 2017
    Review
  15. Article
  16. Article
  17. Article
  18. Review
  19. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 2 countries.

Ian RoweDepartment of Biology, 2 Department of Chemistry and Biochemistry, and 3 Maryland Biophysics Program, University of Maryland, College Park, MD 20742.
Andriy Anishkin
Kishore Kamaraju
Kenjiro Yoshimura
Sergei Sukharev
University of Maryland, College Park · USPennsylvania State University · USShibaura Institute of Technology · JP

Funding

The bacterial mechanosentitive channel as a multimodal sensor deviceR01GM107652 · NIGMS · UNIV OF MARYLAND, COLLEGE PARK · PI ANISHKIN, ANDRIY, SINTIM, HERMAN O · 2013 to 2016
$1.1M
Functional Cycle of a Mechanosensitive ChannelR01GM075225 · NIGMS · UNIV OF MARYLAND, COLLEGE PARK · PI SUKHAREV, SERGEI I · 2006 to 2009
$1.1M
NIGMS NIH HHS GM075225NIGMS NIH HHS GM107652NIGMS NIH HHS R01 GM075225NIGMS NIH HHS R01 GM107652
6 · The paper itself

Abstract

Cells actively regulate the macromolecular excluded volume of the cytoplasm to maintain the reciprocal fraction of free aqueous solution that is optimal for intracellular processes. However, the mechanisms whereby cells sense this critical parameter remain unclear. The mechanosensitive channel of small conductance (MscS channel), which is the major regulator of turgor in bacteria, mediates efflux of small osmolytes in response to increased membrane tension. At moderate sustained tensions produced by a decrease in external osmolarity, MscS undergoes slow adaptive inactivation; however, it inactivates abruptly in the presence of cytoplasmic crowding agents. To understand the mechanism underlying this rapid inactivation, we combined extrapolated and equilibrium molecular dynamics simulations with electrophysiological analyses of MscS mutants to explore possible transitions of MscS and generated models of the resting and inactivated states. Our models suggest that the coupling of the gate formed by TM3 helices to the peripheral TM1-TM2 pairs depends on the axial position of the core TM3 barrel relative to the TM1-TM2 shaft and the state of the associated hollow cytoplasmic domain ("cage"). They also indicate that the tension-driven inactivation transition separates the gate from the peripheral helices and promotes kinks in TM3s at G113 and that this conformation is stabilized by association of the TM3b segment with the β domain of the cage. We found that mutations destabilizing the TM3b-β interactions preclude inactivation and make the channel insensitive to crowding agents and voltage; mutations that strengthen this association result in a stable closed state and silent inactivation. Steered simulations showed that pressure exerted on the cage bottom in the inactivated state reduces the volume of the cage in the cytoplasm and at the same time increases the footprint of the transmembrane domain in the membrane, implying coupled sensitivity to both membrane tension and crowding pressure. The cage, therefore, provides feedback on the increasing crowding that disengages the gate and prevents excessive draining and condensation of the cytoplasm. We discuss the structural mechanics of cells surrounded by an elastic cell wall where this MscS-specific feedback mechanism may be necessary.

Indexed as

Ion Channel GatingAmino Acid SequenceCytoplasmEscherichia coliEscherichia coli ProteinsFicollIon ChannelsMolecular Dynamics SimulationMolecular Sequence DataMutationProtein Structure, TertiaryEscherichia coli ProteinsFicollIon ChannelsMscS protein, E coli

Identifiers

PMID24778428
PMCPMC4003192
OpenAlexW2083933340

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.