Evidence map›Paper›PMID 24776982›Full record

ArticleNature communications2014

Mutation rate plasticity in rifampicin resistance depends on Escherichia coli cell-cell interactions.

Rok Krašovec, Roman V Belavkin, John A D Aston, Alastair Channon, Elizabeth Aston, Bharat M Rash, Manikandan Kadirvel, Sarah Forbes, Christopher G Knight

Open access · hybridAbstract read
In one paragraph

Article in Nature communications, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 43 papers.

0numbers the graph read from it
0cells of the map it votes in
43citing papers in PubMed
5.6field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

43 citing papers in PubMed, 92 citations in OpenAlex.

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  13. Antibiotic perseverance increases the risk of resistance development.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  14. Review
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  19. Article
  20. Emergent robustness of bacterial quorum sensing in fluid flow.Proceedings of the National Academy of Sciences of the United States of America · 2021
    Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 1 country.

Rok KrašovecFaculty of Life Sciences, The University of Manchester, Michael Smith Building, Manchester M13 9PT, UK.
Roman V BelavkinSchool of Science and Technology, Middlesex University, London NW4 4BT, UK.
John A D Aston1] Statistical Laboratory, DPMMS, University of Cambridge, Cambridge CB3 0WB, UK [2] Department of Statistics, University of Warwick, Warwick CV4 7AL, UK.
Alastair ChannonResearch Institute for the Environment, Physical Sciences and Applied Mathematics, Keele University, Keele ST5 5BG, UK.
Elizabeth AstonResearch Institute for the Environment, Physical Sciences and Applied Mathematics, Keele University, Keele ST5 5BG, UK.
Bharat M RashFaculty of Life Sciences, The University of Manchester, Michael Smith Building, Manchester M13 9PT, UK.
Manikandan Kadirvel1] Wolfson Molecular Imaging Centre, The University of Manchester, Manchester M20 3LJ, UK [2] Manchester Pharmacy School, The University of Manchester, Manchester M13 9PT, UK.
Sarah ForbesManchester Pharmacy School, The University of Manchester, Manchester M13 9PT, UK.
Christopher G KnightFaculty of Life Sciences, The University of Manchester, Michael Smith Building, Manchester M13 9PT, UK.
University of Manchester · GBKeele University · GBMiddlesex University · GBUniversity of Cambridge · GB

Funding

Biotechnology and Biological Sciences Research Council BB/L009579/1Cancer Research UK 16465Cancer Research UK 18097Wellcome Trust 082453Wellcome Trust 082453/Z/07/Z
6 · The paper itself

Abstract

Variation of mutation rate at a particular site in a particular genotype, in other words mutation rate plasticity (MRP), can be caused by stress or ageing. However, mutation rate control by other factors is less well characterized. Here we show that in wild-type Escherichia coli (K-12 and B strains), the mutation rate to rifampicin resistance is plastic and inversely related to population density: lowering density can increase mutation rates at least threefold. This MRP is genetically switchable, dependent on the quorum-sensing gene luxS--specifically its role in the activated methyl cycle--and is socially mediated via cell-cell interactions. Although we identify an inverse association of mutation rate with fitness under some circumstances, we find no functional link with stress-induced mutagenesis. Our experimental manipulation of mutation rates via the social environment raises the possibility that such manipulation occurs in nature and could be exploited medically.

Indexed as

Genetic VariationMutation RateRifampinAnalysis of VarianceBacterial ProteinsCarbon-Sulfur LyasesDNA PrimersDrug Resistance, BacterialEscherichia coliGenetic FitnessMicrobial InteractionsPopulation DensityReal-Time Polymerase Chain ReactionBacterial ProteinsCarbon-Sulfur LyasesDNA PrimersLuxS protein, BacteriaRifampin

Identifiers

PMID24776982
PMCPMC4007418
OpenAlexW2145625676

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.