Evidence map›Paper›PMID 24772387›Full record

ArticleCurrent chemical genomics and translational medicine2014

Identification of thyroid hormone receptor active compounds using a quantitative high-throughput screening platform.

Jaime Freitas, Nicole Miller, Brenda J Mengeling, Menghang Xia, Ruili Huang, Keith Houck, Ivonne M C M Rietjens, J David Furlow, Albertinka J Murk

Abstract read
In one paragraph

Article in Current chemical genomics and translational medicine, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed.

  1. Review
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  7. Identifying CAR Modulators Utilizing a Reporter Gene Assay.Methods in molecular biology (Clifton, N.J.) · 2022
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Jaime FreitasDivision of Toxicology, Wageningen University, Tuinlaan 5, 6703 HE Wageningen, The Netherlands ; Group of Cell Activation and Gene Expression, Institute for Molecular and Cellular Biology, University of Porto, Porto, Portugal.
Nicole MillerNational Center for Advancing Translational Sciences, National Institutes of Health, Bethesda, MD, 20892, USA.
Brenda J MengelingDepartment of Neurobiology, Physiology, and Behavior, University of California, Davis 95616, USA.
Menghang XiaNational Center for Advancing Translational Sciences, National Institutes of Health, Bethesda, MD, 20892, USA.
Ruili HuangNational Center for Advancing Translational Sciences, National Institutes of Health, Bethesda, MD, 20892, USA.
Keith HouckNational Center for Computational Toxicology, Office of Research and Development, U.S. Environmental Protection Agency, Research Triangle Park, North Carolina 27711, USA.
Ivonne M C M RietjensDivision of Toxicology, Wageningen University, Tuinlaan 5, 6703 HE Wageningen, The Netherlands.
J David FurlowDepartment of Neurobiology, Physiology, and Behavior, University of California, Davis 95616, USA.
Albertinka J MurkDivision of Toxicology, Wageningen University, Tuinlaan 5, 6703 HE Wageningen, The Netherlands ; Subdepartment of Environmental Technology, Wageningen University, and Wageningen-IMARES, Axis Z (Building number 118), Room TT.1.100, Bornse Weilanden 96708, WG Wageningen, The Netherlands.

Funding

NIH Chemical Genomics CenterZIBTR000004 · NCATS · NATIONAL CENTER FOR ADVANCING TRANSLATIONAL SCIENCES · PI MCKEW, JOHN · 2012 to 2014
$52.3M
6 · The paper itself

Abstract

To adapt the use of GH3.TRE-Luc reporter gene cell line for a quantitative high-throughput screening (qHTS) platform, we miniaturized the reporter gene assay to a 1536-well plate format. 1280 chemicals from the Library of Pharmacologically Active Compounds (LOPAC) and the National Toxicology Program (NTP) 1408 compound collection were analyzed to identify potential thyroid hormone receptor (TR) agonists and antagonists. Of the 2688 compounds tested, eight scored as potential TR agonists when the positive hit cut-off was defined at ≥10% efficacy, relative to maximal triiodothyronine (T3) induction, and with only one of those compounds reaching ≥20% efficacy. One common class of compounds positive in the agonist assays were retinoids such as all-trans retinoic acid, which are likely acting via the retinoid-X receptor, the heterodimer partner with the TR. Five potential TR antagonists were identified, including the antiallergy drug tranilast and the anxiolytic drug SB 205384 but also some cytotoxic compounds like 5-fluorouracil. None of the inactive compounds were structurally related to T3, nor had been reported elsewhere to be thyroid hormone disruptors, so false negatives were not detected. None of the low potency (>100µM) TR agonists resembled T3 or T4, thus these may not bind directly in the ligand-binding pocket of the receptor. For TR agonists, in the qHTS, a hit cut-off of ≥20% efficacy at 100 µM may avoid identification of positives with low or no physiological relevance. The miniaturized GH3.TRE-Luc assay offers a promising addition to the in vitro test battery for endocrine disruption, and given the low percentage of compounds testing positive, its high-throughput nature is an important advantage for future toxicological screening.

Indexed as

Endocrine disruptionpituitary cellsquantitative high-throughput screeningreporter gene assayretinoid-X receptor.thyroid hormone receptor

Identifiers

PMID24772387
PMCPMC3999704

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.