Evidence map›Paper›PMID 24770613›Full record

ArticleTransplantation2014

Association of genetic variants with rapid fibrosis: progression after liver transplantation for hepatitis C.

Jennifer E Layden, Bamidele O Tayo, Scott J Cotler, Nina M Clark, Kristine Baraoidan, Scott L Friedman, Richard S Cooper

Abstract read
In one paragraph

Article in Transplantation, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.3field-weighted citation impact, top 40% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 7 citations in OpenAlex.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Jennifer E Layden1 Department of Public Health Sciences, Stritch School of Medicine, Loyola University Medical School, Maywood, IL. 2 Department of Medicine, Loyola Stritch School of Medicine, Loyola University Medical School, Maywood, IL. 3 University of Illinois at Chicago, Chicago, IL. 4 Division of Liver Diseases, Icahn School of Medicine at Mt Sinai, New York, NY. 5 Address correspondence to: J. Layden, M.D., Ph.D., Departments of Medicine and Public Health Sciences, Loyola University Medical School, Fahey-116, 2160 S. First Ave, Maywood, IL 60153.
Bamidele O Tayo
Scott J Cotler
Nina M Clark
Kristine Baraoidan
Scott L Friedman
Richard S Cooper
University of Illinois Chicago · US

Funding

Center for Clinical and Translational ScienceUL1TR000050 · NCATS · UNIVERSITY OF ILLINOIS AT CHICAGO · PI AZAR, DIMITRI T, MERMELSTEIN, ROBIN J. · 2012 to 2014
$9.8M
The Role of KLF6 in Hepatic FibrosisR01DK056621 · NIDDK · MOUNT SINAI SCHOOL OF MEDICINE OF NYU · PI FRIEDMAN, SCOTT L. · 2000 to 2019
$6.2M
THE ROLE OF STELLATE CELLS IN HEPATIC FIBROSISR01DK037340 · NIDDK · UNIVERSITY OF CALIFORNIA SAN FRANCISCO · PI FRIEDMAN, SCOTT L. · 1987 to 2010
$3.5M
Project 2P20AA017067 · NIAAA · ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI · PI FRIEDMAN, SCOTT L. · 2008 to 2012
$2.5M
Autophagy during hepatic stellate cell activation in alcoholic liver injuryR01AA020709 · NIAAA · ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI · PI FRIEDMAN, SCOTT L. · 2011 to 2015
$1.8M
NCATS NIH HHS UL1 TR000050NIAAA NIH HHS P20 AA017067NIAAA NIH HHS R01 AA020709NIDDK NIH HHS R01 DK037340NIDDK NIH HHS R01 DK056621NIDDK NIH HHS R01DK56621
6 · The paper itself

Abstract

backgroundRecurrence of hepatitis C, the main indication for liver transplantation in the United States, leads to rapid fibrosis progression and worse outcomes compared to other indications. While clinical variables play a role, they are insufficient to explain all inter-patient variability in posttransplant fibrosis progression. Genetic factors associated with hepatitis C virus (HCV) outcomes have been identified, but limited studies have been conducted in the context of HCV-related liver transplantation. Therefore, the purpose of this study was to examine candidate genes related to the immune response and rate of fibrosis in subjects undergoing liver transplantation for HCV.

methodsOne hundred twelve recipients with detailed posttransplant fibrosis and clinical information were genotyped using 25 single nucleotide variants (SNVs), including five SNVs within the IL28B gene region. Associations between SNVs and rapid fibrosis progression were performed controlling for pertinent clinical variables and haplotype analyses for the IL28B gene were completed.

resultsSignificant multivariable associations were found for rs8099917 (IL28B), rs1991401 (DDX5), rs4969168 (SOC3), and rs7976497 (MLEC). The minor allele was protective against rapid fibrosis progression for the IL28B SNV (G allele), MLEC SNV (T allele), and DDX5 SNV (G allele). For the SOC3 SNV, the minor allele (A) increased the risk for rapid fibrosis progression. Additionally, two recipient haplotype structures for IL28B were significantly associated with rapid fibrosis progression.

conclusionsThese findings indicate that recipient genetic factors play a role in posttransplant HCV-related fibrosis progression. Molecular studies of these pathways may elucidate the pathogenesis of posttransplant fibrosis progression and provide risk prediction markers.

Indexed as

Genetic VariationLiver TransplantationAdultAllelesDisease ProgressionDNAFemaleFollow-Up StudiesGenotypeHaplotypesHepatitis C, ChronicHumansInterferon LambdaInterferonsInterleukinsLiverDNAInterferon Lambdainterferon-lambda, humanInterferonsInterleukins

Identifiers

PMID24770613
PMCPMC4524502
OpenAlexW2070931022

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.