Evidence map›Paper›PMID 24770493›Full record

ArticleMolecular bioSystems2014

Role of cytoskeletal proteins in cerebral cavernous malformation signaling pathways: a proteomic analysis.

Sarah Schwartz Baxter, Christopher F Dibble, Warren C Byrd, Jim Carlson, Charles Russell Mack, Ivandario Saldarriaga, Sompop Bencharit

Open access · hybridAbstract read
In one paragraph

Article in Molecular bioSystems, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.4field-weighted citation impact, top 34% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 12 citations in OpenAlex.

  1. Article
  2. Observational
  3. Article
  4. Article
  5. Article
  6. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 1 country.

Sarah Schwartz BaxterDavid H. Murdock Research Institute, North Carolina Research Campus, Kannapolis, NC 28081, USA.
Christopher F Dibble
Warren C Byrd
Jim Carlson
Charles Russell Mack
Ivandario Saldarriaga
Sompop Bencharit
University of North Carolina at Chapel Hill · USCommunities In Schools of Orange County · USDavid H. Murdock Research Institute · USNorth Carolina Clinical Research · US

Funding

Role of Programmed Cell Death10 (PDCD10) in p38 MAP kinase activation and PDK1 siR21HL092338 · NHLBI · UNIV OF NORTH CAROLINA CHAPEL HILL · PI BENCHARIT, SOMPOP · 2009 to 2010
$407k
NHLBI NIH HHS R21 HL092338NHLBI NIH HHS R21HL092338
6 · The paper itself

Abstract

Three genetic mutations were found to cause cerebral cavernous malformation (CCM), a vascular anomaly predisposing affected individuals to hemorrhagic stroke. These CCM proteins function together as a protein complex in the cell. Loss of expression of each CCM gene results in loss of in vitro endothelial tube formation. Label-free differential protein expression analysis using multidimensional liquid chromatography/tandem mass spectrometry (2D-LC-MS/MS) was applied to explore the proteomic profile for loss of each CCM gene expression in mouse endothelial stem cells (MEES) compared to mock shRNA and no shRNA control cell-lines. Differentially expressed proteins were identified (p < 0.05). 120 proteins were differentially expressed among the cell-lines. Principal component analysis and cluster analysis show the effects of individual knockdown. In all knockdown cell-lines, altered expression of cytoskeletal proteins is the most common. While all CCM mutations result in similar pathology, different CCM mutations have their own distinct pathogenesis in cell signaling.

Indexed as

Signal TransductionAnimalsCell LineChromatography, LiquidCluster AnalysisCytoskeletal ProteinsEndothelial CellsGene Expression RegulationGene Knockdown TechniquesHemangioma, Cavernous, Central Nervous SystemHumansMicePrincipal Component AnalysisProteomicsTandem Mass SpectrometryCytoskeletal Proteins

Identifiers

PMID24770493
PMCPMC4043921
OpenAlexW2025139875

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.