Evidence map›Paper›PMID 24770417›Full record

ArticleThe Journal of biological chemistry2014

Helicase SUV3, polynucleotide phosphorylase, and mitochondrial polyadenylation polymerase form a transient complex to modulate mitochondrial mRNA polyadenylated tail lengths in response to energetic changes.

Dennis Ding-Hwa Wang, Xuning Emily Guo, Aram Sandaldjian Modrek, Chi-Fen Chen, Phang-Lang Chen, Wen-Hwa Lee

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
1.4field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed, 34 citations in OpenAlex.

  1. Article
  2. Article
  3. [SUV3 knockdown inhibits proliferation, migration, and invasion of hepatocellular carcinoma cells and induces PD-L1 expression].Zhonghua gan zang bing za zhi = Zhonghua ganzangbing zazhi = Chinese journal of hepatology · 2024
    Article
  4. SUV3 Helicase and Mitochondrial Homeostasis.International journal of molecular sciences · 2023
    Review
  5. Article
  6. Article
  7. Article
  8. Review
  9. Review
  10. Article
  11. Mechanisms and regulation of protein synthesis in mitochondria.Nature reviews. Molecular cell biology · 2021
    Review
  12. Review
  13. Article
  14. Marek's Disease Virus Infection Induced Mitochondria Changes in Chickens.International journal of molecular sciences · 2019
    Article
  15. Review
  16. Article
  17. Terminal nucleotidyl transferases (TENTs) in mammalian RNA metabolism.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2018
    Review
  18. Article
  19. Review
  20. Human mitochondrial nucleases.The FEBS journal · 2017
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 2 countries.

Dennis Ding-Hwa WangFrom the Department of Biological Chemistry, School of Medicine, University of California Irvine, Irvine, California 92697 and.
Xuning Emily GuoFrom the Department of Biological Chemistry, School of Medicine, University of California Irvine, Irvine, California 92697 and.
Aram Sandaldjian ModrekFrom the Department of Biological Chemistry, School of Medicine, University of California Irvine, Irvine, California 92697 and.
Chi-Fen ChenFrom the Department of Biological Chemistry, School of Medicine, University of California Irvine, Irvine, California 92697 and.
Phang-Lang ChenFrom the Department of Biological Chemistry, School of Medicine, University of California Irvine, Irvine, California 92697 and.
Wen-Hwa LeeFrom the Department of Biological Chemistry, School of Medicine, University of California Irvine, Irvine, California 92697 and the Graduate Institute of Clinical Medical Science, China Medical University, Taichung 40402, Taiwan whlee@uci.edu.
University of California, Irvine · USChina Medical University · TW

Funding

Mitochondrial Roles of the SUV3 in Premature Aging and CancerR01AG027877 · NIA · UNIVERSITY OF CALIFORNIA-IRVINE · PI LEE, WEN-HWA · 2008 to 2012
$1.5M
Translational Research in Cancer Genomic MedicineT32CA113265 · NCI · UNIVERSITY OF CALIFORNIA-IRVINE · PI LEE, WEN-HWA · 2007 to 2011
$1.4M
BLRD VA IK2 BX006111NCI NIH HHS T32 CA113265NIA NIH HHS AG027877NIA NIH HHS R01 AG027877
6 · The paper itself

Abstract

Mammalian mitochondrial mRNA (mt-mRNA) transcripts are polyadenylated at the 3' end with different lengths. The SUV3·PNPase complex and mtPAP have been shown to degrade and polyadenylate mt mRNA, respectively. How these two opposite actions are coordinated to modulate mt-mRNA poly(A) lengths is of interest to pursue. Here, we demonstrated that a fraction of the SUV3·PNPase complex interacts with mitochondrial polyadenylation polymerase (mtPAP) under low mitochondrial matrix inorganic phosphate (Pi) conditions. In vitro binding experiments using purified proteins suggested that SUV3 binds to mtPAP through the N-terminal region around amino acids 100-104, distinctive from the C-terminal region around amino acids 510-514 of SUV3 for PNPase binding. mtPAP does not interact with PNPase directly, and SUV3 served as a bridge capable of simultaneously binding with mtPAP and PNPase. The complex consists of a SUV3 dimer, a mtPAP dimer, and a PNPase trimer, based on the molecular sizing experiments. Mechanistically, SUV3 provides a robust single strand RNA binding domain to enhance the polyadenylation activity of mtPAP. Furthermore, purified SUV3·PNPase·mtPAP complex is capable of lengthening or shortening the RNA poly(A) tail lengths in low or high Pi/ATP ratios, respectively. Consistently, the poly(A) tail lengths of mt-mRNA transcripts can be lengthened or shortened by altering the mitochondrial matrix Pi levels via selective inhibition of the electron transport chain or ATP synthase, respectively. Taken together, these results suggested that SUV3·PNPase·mtPAP form a transient complex to modulate mt-mRNA poly(A) tail lengths in response to cellular energy changes.

Indexed as

Binding SitesDEAD-box RNA HelicasesDNA-Directed RNA PolymerasesEnergy MetabolismExoribonucleasesHEK293 CellsHumansMitochondriaMitochondrial ProteinsPhosphatesPolyadenylationProtein BindingProtein MultimerizationRNA, MessengerRNA, MitochondrialDEAD-box RNA HelicasesDNA-Directed RNA PolymerasesExoribonucleasesmitochondrial messenger RNAMitochondrial ProteinsMTPAP protein, humanPhosphatesRNA, MessengerRNA, MitochondrialSUPV3L1 protein, humanBioenergeticsMitochondriaMitochondrial mRNA Poly(A) tailsmtPAPPNPasePolyadenylationRNA HelicaseRNA ProcessingSUV3

Identifiers

PMID24770417
PMCPMC4059117
OpenAlexW2086224264

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.