Evidence map›Paper›PMID 24770414›Full record

ArticleThe Journal of biological chemistry2014

Cloning and functional characterization of three branch point oxidosqualene cyclases from Withania somnifera (L.) dunal.

Niha Dhar, Satiander Rana, Sumeer Razdan, Wajid Waheed Bhat, Aashiq Hussain, Rekha S Dhar, Samantha Vaishnavi, Abid Hamid, Ram Vishwakarma, Surrinder K Lattoo

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 30 papers.

0numbers the graph read from it
0cells of the map it votes in
30citing papers in PubMed
3.8field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

30 citing papers in PubMed, 80 citations in OpenAlex.

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  18. Phytochemistry reviews : proceedings of the Phytochemical Society of Europe · 2018
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 2 countries.

Niha DharFrom the Divisions of Plant Biotechnology.
Satiander RanaFrom the Divisions of Plant Biotechnology.
Sumeer RazdanFrom the Divisions of Plant Biotechnology.
Wajid Waheed BhatFrom the Divisions of Plant Biotechnology.
Aashiq HussainCancer Pharmacology, and.
Rekha S DharFrom the Divisions of Plant Biotechnology.
Samantha Vaishnavithe School of Biotechnology, Shri Mata Vaishno Devi University, Katra-182320, India.
Abid HamidCancer Pharmacology, and.
Ram VishwakarmaMedicinal Chemistry, CSIR-Indian Institute of Integrative Medicine, Jammu Tawi-180001, India and.
Surrinder K LattooFrom the Divisions of Plant Biotechnology, sklattoo@iiim.ac.in.
Cancer Genetics (United States) · USShri Mata Vaishno Devi University · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Oxidosqualene cyclases (OSCs) positioned at a key metabolic subdividing junction execute indispensable enzymatic cyclization of 2,3-oxidosqualene for varied triterpenoid biosynthesis. Such branch points present favorable gene targets for redirecting metabolic flux toward specific secondary metabolites. However, detailed information regarding the candidate OSCs covering different branches and their regulation is necessary for the desired genetic manipulation. The aim of the present study, therefore, was to characterize members of OSC superfamily from Withania somnifera (Ws), a medicinal plant of immense repute known to synthesize a large array of biologically active steroidal lactone triterpenoids called withanolides. Three full-length OSC cDNAs, β-amyrin synthase (WsOSC/BS), lupeol synthase (WsOSC/LS), and cycloartenol synthase (WsOSC/CS), having open reading frames of 2289, 2268, and 2277 bp, were isolated. Heterologous expression in Schizosaccharomyces pombe, LC-MS analyses, and kinetic studies confirmed their monofunctionality. The three WsOSCs were found to be spatially regulated at transcriptional level with WsOSC/CS being maximally expressed in leaf tissue. Promoter analysis of three WsOSCs genes resulted in identification of distinct cis-regulatory elements. Further, transcript profiling under methyl jasmonate, gibberellic acid, and yeast extract elicitations displayed differential transcriptional regulation of each of the OSCs. Changes were also observed in mRNA levels under elicitations and further substantiated with protein expression levels by Western blotting. Negative regulation by yeast extract resulted in significant increase in withanolide content. Empirical evidence suggests that repression of competitive branch OSCs like WsOSC/BS and WsOSC/LS possibly leads to diversion of substrate pool toward WsOSC/CS for increased withanolide production.

Indexed as

Amino Acid SequenceCloning, MolecularGene Expression Regulation, PlantIntramolecular TransferasesMolecular Sequence DataOpen Reading FramesPlant ProteinsProtein Structure, TertiaryTranscription, GeneticWithaniaWithanolides2,3-oxidosqualene-beta-amyrin-cyclasecycloartenol synthaseIntramolecular Transferaseslupeol synthasePlant ProteinsWithanolidesGene RegulationIsoprenoidMass Spectrometry (MS)Metabolic EngineeringWestern Blot

Identifiers

PMID24770414
PMCPMC4059165
OpenAlexW2090184308

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.