Evidence map›Paper›PMID 24763339›Full record

ArticlePLoS genetics2014

Isl1 directly controls a cholinergic neuronal identity in the developing forebrain and spinal cord by forming cell type-specific complexes.

Hyong-Ho Cho, Francesca Cargnin, Yujin Kim, Bora Lee, Ryuk-Jun Kwon, Heejin Nam, Rongkun Shen, Anthony P Barnes, Jae W Lee, Seunghee Lee and 1 more

Open access · goldAbstract read
In one paragraph

Article in PLoS genetics, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 74 papers.

0numbers the graph read from it
0cells of the map it votes in
74citing papers in PubMed
5.4field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

74 citing papers in PubMed, 119 citations in OpenAlex.

  1. Article
  2. Regulatory logic of neuronal differentiation in theProceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  3. Article
  4. Regulatory logic of neuronal identity specification inbioRxiv : the preprint server for biology · 2025
    Article
  5. Article
  6. Review
  7. Article
  8. Molecular and Cellular Mechanisms of Motor Circuit Development.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2024
    Review
  9. Article
  10. Article
  11. Article
  12. Review
  13. Article
  14. Article
  15. Review
  16. Loss ofFrontiers in neuroscience · 2023
    Article
  17. Review
  18. Article
  19. Review
  20. Article

14 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

11 authors at 4 institutions in 2 countries.

Hyong-Ho ChoPediatric Neuroscience Research Program, Papé Family Pediatric Research Institute, Department of Pediatrics, Portland, Oregon, United States of America; Department of Otolaryngology-Head and Neck Surgery, Chonnam National University Medical School, Gwangju, Korea.
Francesca CargninPediatric Neuroscience Research Program, Papé Family Pediatric Research Institute, Department of Pediatrics, Portland, Oregon, United States of America.
Yujin KimPediatric Neuroscience Research Program, Papé Family Pediatric Research Institute, Department of Pediatrics, Portland, Oregon, United States of America.
Bora LeePediatric Neuroscience Research Program, Papé Family Pediatric Research Institute, Department of Pediatrics, Portland, Oregon, United States of America.
Ryuk-Jun KwonPediatric Neuroscience Research Program, Papé Family Pediatric Research Institute, Department of Pediatrics, Portland, Oregon, United States of America.
Heejin NamCollege of Pharmacy and Research Institute of Pharmaceutical Sciences, Seoul National University, Seoul, Korea.
Rongkun ShenPediatric Neuroscience Research Program, Papé Family Pediatric Research Institute, Department of Pediatrics, Portland, Oregon, United States of America; Vollum Institute, Oregon Health & Science University, Portland, Oregon, United States of America.
Anthony P BarnesPediatric Neuroscience Research Program, Papé Family Pediatric Research Institute, Department of Pediatrics, Portland, Oregon, United States of America; Department of Cell and Developmental Biology, Oregon Health & Science University, Portland, Oregon, United States of America.
Jae W LeePediatric Neuroscience Research Program, Papé Family Pediatric Research Institute, Department of Pediatrics, Portland, Oregon, United States of America; Department of Cell and Developmental Biology, Oregon Health & Science University, Portland, Oregon, United States of America.
Seunghee LeeCollege of Pharmacy and Research Institute of Pharmaceutical Sciences, Seoul National University, Seoul, Korea.
Soo-Kyung LeePediatric Neuroscience Research Program, Papé Family Pediatric Research Institute, Department of Pediatrics, Portland, Oregon, United States of America; Vollum Institute, Oregon Health & Science University, Portland, Oregon, United States of America; Department of Cell and Developmental Biology, Oregon Health & Science University, Portland, Oregon, United States of America.
Family Research Institute · USOregon Health & Science University · USSeoul National University · KRVollum Institute · US

Funding

LIM-HD/bHLH Combinatorial Code in MotoneuronsR01NS054941 · NINDS · OREGON HEALTH & SCIENCE UNIVERSITY · PI LEE, SOO-KYUNG · 2006 to 2015
$4.3M
Regulation Code by Nuclear Receptor Coactivator ASC-2R01DK064678 · NIDDK · OREGON HEALTH & SCIENCE UNIVERSITY · PI LEE, JAE W · 2004 to 2016
$4.3M
The Role of STRAD-alpha in Cortical DevelopmentR01NS079433 · NINDS · OREGON HEALTH & SCIENCE UNIVERSITY · PI BARNES, ANTHONY P · 2012 to 2016
$1.7M
Medical Research Council G0700718Medical Research Council G0800674NIDDK NIH HHS R01 DK064678NINDS NIH HHS R01 NS054941NINDS NIH HHS R01 NS079433
6 · The paper itself

Abstract

The establishment of correct neurotransmitter characteristics is an essential step of neuronal fate specification in CNS development. However, very little is known about how a battery of genes involved in the determination of a specific type of chemical-driven neurotransmission is coordinately regulated during vertebrate development. Here, we investigated the gene regulatory networks that specify the cholinergic neuronal fates in the spinal cord and forebrain, specifically, spinal motor neurons (MNs) and forebrain cholinergic neurons (FCNs). Conditional inactivation of Isl1, a LIM homeodomain factor expressed in both differentiating MNs and FCNs, led to a drastic loss of cholinergic neurons in the developing spinal cord and forebrain. We found that Isl1 forms two related, but distinct types of complexes, the Isl1-Lhx3-hexamer in MNs and the Isl1-Lhx8-hexamer in FCNs. Interestingly, our genome-wide ChIP-seq analysis revealed that the Isl1-Lhx3-hexamer binds to a suite of cholinergic pathway genes encoding the core constituents of the cholinergic neurotransmission system, such as acetylcholine synthesizing enzymes and transporters. Consistently, the Isl1-Lhx3-hexamer directly coordinated upregulation of cholinergic pathways genes in embryonic spinal cord. Similarly, in the developing forebrain, the Isl1-Lhx8-hexamer was recruited to the cholinergic gene battery and promoted cholinergic gene expression. Furthermore, the expression of the Isl1-Lhx8-complex enabled the acquisition of cholinergic fate in embryonic stem cell-derived neurons. Together, our studies show a shared molecular mechanism that determines the cholinergic neuronal fate in the spinal cord and forebrain, and uncover an important gene regulatory mechanism that directs a specific neurotransmitter identity in vertebrate CNS development.

Indexed as

AnimalsCell DifferentiationCell LineCholinergic NeuronsDNA-Binding ProteinsEmbryonic Stem CellsGene ExpressionGene Regulatory NetworksHEK293 CellsHumansLIM-Homeodomain ProteinsMiceMotor NeuronsProsencephalonRatsSpinal CordDNA-Binding Proteinsinsulin gene enhancer binding protein Isl-1LIM-Homeodomain ProteinsTranscription Factors

Identifiers

PMID24763339
PMCPMC3998908
OpenAlexW2079742728

What OpenQuestion holds

Textmetadata
LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.