Evidence map›Paper›PMID 24762620›Full record

ArticleEpigenetics2014

Constitutional promoter methylation and risk of familial melanoma.

Paula L Hyland, Laura S Burke, Ruth M Pfeiffer, Melissa Rotunno, David Sun, Prasad Patil, Xiaolin Wu, Margaret A Tucker, Alisa M Goldstein, Xiaohong Rose Yang

Open access · bronzeAbstract read
In one paragraph

Article in Epigenetics, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
1.0field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 14 citations in OpenAlex.

  1. Melanoma susceptibility: an update on genetic and epigenetic findings.International journal of molecular epidemiology and genetics · 2021
    Review
  2. Article
  3. Article
  4. Clinical significance ofOncotarget · 2017
    Article
  5. Article
  6. Review
  7. Article
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 1 institution in 1 country.

Paula L HylandDivision of Cancer Epidemiology and Genetics; National Cancer Institute; National Institutes of Health; Bethesda, MD USA; Cancer Prevention Fellowship Program; Division of Cancer Prevention; National Cancer Institute; National Institutes of Health; Bethesda, MD USA.
Laura S BurkeDivision of Cancer Epidemiology and Genetics; National Cancer Institute; National Institutes of Health; Bethesda, MD USA.
Ruth M PfeifferDivision of Cancer Epidemiology and Genetics; National Cancer Institute; National Institutes of Health; Bethesda, MD USA.
Melissa RotunnoDivision of Cancer Epidemiology and Genetics; National Cancer Institute; National Institutes of Health; Bethesda, MD USA.
David SunLaboratory of Molecular Technology; Scientific Application International Corporation Frederick; National Cancer Institute at Frederick; Frederick, MD USA.
Prasad PatilDivision of Cancer Epidemiology and Genetics; National Cancer Institute; National Institutes of Health; Bethesda, MD USA.
Xiaolin WuLaboratory of Molecular Technology; Scientific Application International Corporation Frederick; National Cancer Institute at Frederick; Frederick, MD USA.
Margaret A TuckerDivision of Cancer Epidemiology and Genetics; National Cancer Institute; National Institutes of Health; Bethesda, MD USA.
Alisa M GoldsteinDivision of Cancer Epidemiology and Genetics; National Cancer Institute; National Institutes of Health; Bethesda, MD USA.
Xiaohong Rose YangDivision of Cancer Epidemiology and Genetics; National Cancer Institute; National Institutes of Health; Bethesda, MD USA.
National Institutes of Health · US

Funding

Intramural NIH HHS
6 · The paper itself

Abstract

Constitutional epigenetic changes detected in blood or non-disease involving tissues have been associated with disease susceptibility. We measured promoter methylation of CDKN2A (p16 and p14ARF) and 13 melanoma-related genes using bisulfite pyrosequencing of blood DNA from 114 cases and 122 controls in 64 melanoma-prone families (26 segregating CDKN2A germline mutations). We also obtained gene expression data for these genes using microarrays from the same blood samples. We observed that CDKN2A epimutation is rare in melanoma families, and therefore is unlikely to cause major susceptibility in families without CDKN2A mutations. Although methylation levels for most gene promoters were very low (<5%), we observed a significantly reduced promoter methylation (odds ratio = 0.63, 95% confidence interval = 0.50, 0.80, P<0.001) and increased expression (fold change = 1.27, P = 0.048) for TNFRSF10C in melanoma cases. Future research in large prospective studies using both normal and melanoma tissues is required to assess the significance of TNFRSF10C methylation and expression changes in melanoma susceptibility.

Indexed as

DNA MethylationPromoter Regions, GeneticAdultAgedCase-Control StudiesCpG IslandsCutaneous Malignant MelanomaFemaleGenes, p16Genetic Association StudiesGenetic Predisposition to DiseaseGerm-Line MutationGPI-Linked ProteinsHumansMaleMelanomaGPI-Linked ProteinsReceptors, Tumor Necrosis Factor, Member 10cTNFRSF10C protein, humanTumor Necrosis Factor Decoy ReceptorsTumor Suppressor Protein p14ARFCDKN2Afamilial melanomaperipheral blood mononuclear cellspromoter methylationTNFRSF10C

Identifiers

PMID24762620
PMCPMC4063827
OpenAlexW2029835863

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.