Evidence map›Paper›PMID 24760347›Full record

ArticleGenome research2014

Somatic mutations found in the healthy blood compartment of a 115-yr-old woman demonstrate oligoclonal hematopoiesis.

Henne Holstege, Wayne Pfeiffer, Daoud Sie, Marc Hulsman, Thomas J Nicholas, Clarence C Lee, Tristen Ross, Jue Lin, Mark A Miller, Bauke Ylstra and 8 more

Abstract read
In one paragraph

Article in Genome research, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 76 papers.

0numbers the graph read from it
0cells of the map it votes in
76citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

76 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
  4. Review
  5. Review
  6. Review
  7. [Clonal hematopoiesis: causes and clinical implications].Innere Medizin (Heidelberg, Germany) · 2022
    Article
  8. Review
  9. Bone Marrow Niches of Hematopoietic Stem and Progenitor Cells.International journal of molecular sciences · 2022
    Review
  10. Molecular Damage in Aging.Nature aging · 2021
    Review
  11. Review
  12. Blood cancer discovery · 2021
    Article
  13. Hematopoiesis during Ontogenesis, Adult Life, and Aging.International journal of molecular sciences · 2021
    Review
  14. Article
  15. Article
  16. Article
  17. Review
  18. Article
  19. Article
  20. Article

16 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors.

Henne HolstegeDepartment of Clinical Genetics, VU University Medical Center, 1007 MB Amsterdam, The Netherlands;
Wayne Pfeiffer
Daoud Sie
Marc Hulsman
Thomas J Nicholas
Clarence C Lee
Tristen Ross
Jue Lin
Mark A Miller
Bauke Ylstra
Hanne Meijers-Heijboer
Martijn H Brugman
Frank J T Staal
Gert Holstege
Marcel J T Reinders
Timothy T Harkins
Samuel Levy
Erik A Sistermans

Funding

Scripps Translational Science Institute (UL1)UL1TR000109 · NCATS · SCRIPPS RESEARCH INSTITUTE, THE · PI TOPOL, ERIC JEFFREY · 2012 to 2013
$4.0M
NCATS NIH HHS UL1 TR000109
6 · The paper itself

Abstract

The somatic mutation burden in healthy white blood cells (WBCs) is not well known. Based on deep whole-genome sequencing, we estimate that approximately 450 somatic mutations accumulated in the nonrepetitive genome within the healthy blood compartment of a 115-yr-old woman. The detected mutations appear to have been harmless passenger mutations: They were enriched in noncoding, AT-rich regions that are not evolutionarily conserved, and they were depleted for genomic elements where mutations might have favorable or adverse effects on cellular fitness, such as regions with actively transcribed genes. The distribution of variant allele frequencies of these mutations suggests that the majority of the peripheral white blood cells were offspring of two related hematopoietic stem cell (HSC) clones. Moreover, telomere lengths of the WBCs were significantly shorter than telomere lengths from other tissues. Together, this suggests that the finite lifespan of HSCs, rather than somatic mutation effects, may lead to hematopoietic clonal evolution at extreme ages.

Indexed as

Clonal EvolutionHematopoiesisMutationAged, 80 and overAT Rich SequenceCell LineageConserved SequenceFemaleGene FrequencyGenomeHematopoietic Stem CellsHumansLeukocytesLongevityTelomereTelomere Shortening

Identifiers

PMID24760347
PMCPMC4009603

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.