ArticlePloS one2014
A comprehensive genome-wide study on tissue-specific and abiotic stress-specific miRNAs in Triticum aestivum.
Article in PloS one, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 43 papers.
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Who cites it
43 citing papers in PubMed.
- Cell-Type Specific miRNA Regulatory Network Responses to ABA Stress Revealed by Time Series Transcriptional Atlases in Arabidopsis.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2025Article
- Characterization of tae-miR156(s) and their response to abiotic stress in wheat (Triticum aestivum L.).BMC plant biology · 2024Article
- Identification and characterization of sulphotransferase (SOT) genes for tolerance against drought and heat in wheat and six related species.Molecular biology reports · 2024Article
- Diversity of Expression Patterns ofCurrent issues in molecular biology · 2024Article
- Article
- High CO2 adaptation mechanisms revealed in the miR156-regulated flowering time pathway.PLoS computational biology · 2023Article
- Comprehensive, integrative genomic analysis of microRNA expression profiles in different tissues of two wheat cultivars with different traits.Functional & integrative genomics · 2022Article
- Rapid sequence and functional diversification of a miRNA superfamily targeting calcium signaling components in seed plants.The New phytologist · 2022Article
- fIdentification of B. napus small RNAs responsive to infection by a necrotrophic pathogen.BMC plant biology · 2021Article
- Tuning Beforehand: A Foresight on RNA Interference (RNAi) and In Vitro-Derived dsRNAs to Enhance Crop Resilience to Biotic and Abiotic Stresses.International journal of molecular sciences · 2021Review
- Deciphering the role of microRNAs duringPhysiology and molecular biology of plants : an international journal of functional plant biology · 2021Article
- Small RNAs: The Essential Regulators in Plant Thermotolerance.Frontiers in plant science · 2021Review
- Stress induced dynamic adjustment of conserved miR164:NAC module.Plant-environment interactions (Hoboken, N.J.) · 2020Article
- Research Tools for the Functional Genomics of Plant miRNAs During Zygotic and Somatic Embryogenesis.International journal of molecular sciences · 2020Review
- Lineage-Specific Evolved MicroRNAs RegulatingInternational journal of molecular sciences · 2019Article
- Analysis of miRNAs in Two Wheat Cultivars Infected WithFrontiers in plant science · 2019Article
- miRNomes involved in imparting thermotolerance to crop plants.3 Biotech · 2018Review
- Plant reference genes for development and stress response studies.Journal of biosciences · 2018Review
- Article
- Hybrid incompatibilities in interspecific crosses between tetraploid wheat and its wild diploid relative Aegilops umbellulata.Plant molecular biology · 2017Article
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Authors and funding
5 authors.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Productivity of wheat crop is largely dependent on its growth and development that, in turn, is mainly regulated by environmental conditions, including abiotic stress factors. miRNAs are key regulators of gene expression networks involved in diverse aspects of development and stress responses in plants. Using high-throughput sequencing of eight small RNA libraries prepared from diverse abiotic stresses and tissues, we identified 47 known miRNAs belonging to 20 families, 49 true novel and 1030 candidate novel miRNAs. Digital gene expression analysis revealed that 257 miRNAs exhibited tissue-specific expression and 74 were associated with abiotic stresses. Putative target genes were predicted for miRNAs identified in this study and their grouping into functional categories indicated that the putative targets were involved in diverse biological processes. RLM-RACE of predicted targets of three known miRNAs (miR156, miR160 and miR164) confirmed their mRNA cleavage, thus indicating their regulation at post-transcriptional level by the corresponding miRNAs. Mapping of the sequenced data onto the wheat progenitors and closely related monocots revealed a large number of evolutionary conserved miRNAs. Additional expression profiling of some of these miRNAs in other abiotic stresses underline their involvement in multiple stresses. Our findings provide valuable resource for an improved understanding of the role of miRNAs in stress tolerance as well as plant development.
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