Evidence map›Paper›PMID 24759697›Full record

ArticlePloS one2014

Posterior amorphous corneal dystrophy is associated with a deletion of small leucine-rich proteoglycans on chromosome 12.

Michelle J Kim, Ricardo F Frausto, George O D Rosenwasser, Tina Bui, Derek J Le, Edwin M Stone, Anthony J Aldave

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
3.2field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 38 citations in OpenAlex.

  1. SPARCL1 sparkles new insight into corneal dystrophies.European journal of human genetics : EJHG · 2024
    Article
  2. Article
  3. Article
  4. Corneal dystrophies.Nature reviews. Disease primers · 2020
    Review
  5. Article
  6. Article
  7. Article
  8. Transcriptomic Profiling of Posterior Polymorphous Corneal Dystrophy.Investigative ophthalmology & visual science · 2017
    Article
  9. Review
  10. Article
  11. Review
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Michelle J KimStein Eye Institute, David Geffen School of Medicine at UCLA, Los Angeles, California, United States of America.
Ricardo F FraustoStein Eye Institute, David Geffen School of Medicine at UCLA, Los Angeles, California, United States of America.
George O D RosenwasserThe Central Pennsylvania Eye Institute, Hershey, Pennsylvania, United States of America.
Tina BuiStein Eye Institute, David Geffen School of Medicine at UCLA, Los Angeles, California, United States of America.
Derek J LeStein Eye Institute, David Geffen School of Medicine at UCLA, Los Angeles, California, United States of America.
Edwin M StoneDepartment of Ophthalmology, The University of Iowa Hospitals and Clinics, Iowa City, Iowa, United States of America; Howard Hughes Medical Institute, Chevy Chase, Maryland, United States of America.
Anthony J AldaveStein Eye Institute, David Geffen School of Medicine at UCLA, Los Angeles, California, United States of America.
Hershey (United States) · USHoward Hughes Medical Institute · US

Funding

Identification and Characterization of the Genetic Basis of PPCDR01EY022082 · NEI · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI ALDAVE, ANTHONY JOHN · 2013 to 2017
$1.9M
NEI NIH HHS R01 EY022082
6 · The paper itself

Abstract

Posterior amorphous corneal dystrophy (PACD) is a rare, autosomal dominant disorder affecting the cornea and iris. Next-generation sequencing of the previously identified PACD linkage interval on chromosome 12q21.33 failed to yield a pathogenic mutation. However, array-based copy number analysis and qPCR were used to detect a hemizygous deletion in the PACD linkage interval containing 4 genes encoding small leucine-rich proteoglycans (SLRPs): KERA, LUM, DCN, and EPYC. Two other unrelated families with PACD also demonstrated deletion of these SLRPs, which play important roles in collagen fibrillogenesis and matrix assembly. Given that these genes are essential to the maintenance of corneal clarity and the observation that knockout murine models display corneal phenotypic similarities to PACD, we provide convincing evidence that PACD is associated with haploinsufficiency of these SLRPs.

Indexed as

Chondroitin Sulfate ProteoglycansChromosomes, Human, Pair 12Corneal Dystrophies, HereditaryDecorinFemaleGenetic LinkageHigh-Throughput Nucleotide SequencingHumansKeratan SulfateLumicanMalePedigreeProteoglycansSequence DeletionSmall Leucine-Rich ProteoglycansChondroitin Sulfate ProteoglycansDCN protein, humanDecorinEPYC protein, humanKERA protein, humanKeratan SulfateLumicanLUM protein, humanProteoglycansSmall Leucine-Rich Proteoglycans

Identifiers

PMID24759697
PMCPMC3997350
OpenAlexW2081352869

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.