Evidence map›Paper›PMID 24755630›Full record

ArticlePloS one2014

Transcriptional profiling of Mycobacterium tuberculosis replicating ex vivo in blood from HIV- and HIV+ subjects.

Michelle B Ryndak, Krishna K Singh, Zhengyu Peng, Susan Zolla-Pazner, Hualin Li, Lu Meng, Suman Laal

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
2.0field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 25 citations in OpenAlex.

  1. Genome-wide transcriptional landscape ofFrontiers in immunology · 2026
    Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Frontiers in cellular and infection microbiology · 2019
    Review
  7. Article
  8. Transcriptional Profiling ofGenomics data · 2015
    Article
  9. Article
  10. Article
  11. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 2 countries.

Michelle B RyndakDepartment of Pathology, New York University Langone Medical Center, New York, New York, United States of America.
Krishna K SinghDepartment of Pathology, New York University Langone Medical Center, New York, New York, United States of America.
Zhengyu PengInstitutes of Biomedical Sciences, Shanghai Medical College, Fudan University, Shanghai, China.
Susan Zolla-PaznerVeterans Affairs New York Harbor Healthcare System, New York, New York, United States of America; Department of Pathology, New York University Langone Medical Center, New York, New York, United States of America.
Hualin LiCenter for Virology and Vaccine Research, Beth Israel Deaconess Medical Center, Harvard Medical School, Boston, Massachusetts, United States of America.
Lu MengInstitutes of Biomedical Sciences, Shanghai Medical College, Fudan University, Shanghai, China.
Suman LaalVeterans Affairs New York Harbor Healthcare System, New York, New York, United States of America; Department of Pathology, New York University Langone Medical Center, New York, New York, United States of America.
NYU Langone Health · USShanghai Medical College of Fudan University · CNBeth Israel Deaconess Medical Center · USVA NY Harbor Healthcare System · US

Funding

VIROLOGY COREP30AI027742 · NIAID · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI DUSTIN, MICHAEL LORAN · 1989 to 2010
$19.4M
TRAINING PROGRAM IN TB AND HIV PREVENTION AND TREATMENTD43TW001409 · FIC · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI LAAL, SUMAN · 2000 to 2011
$4.6M
FIC NIH HHS D43 TW001409NIAID NIH HHS P30 AI027742
6 · The paper itself

Abstract

Hematogenous dissemination of Mycobacterium tuberculosis (M. tb) occurs during both primary and reactivated tuberculosis (TB). Although hematogenous dissemination occurs in non-HIV TB patients, in ∼80% of these patients, TB manifests exclusively as pulmonary disease. In contrast, extrapulmonary, disseminated, and/or miliary TB is seen in 60-70% of HIV-infected TB patients, suggesting that hematogenous dissemination is likely more common in HIV+ patients. To understand M. tb adaptation to the blood environment during bacteremia, we have studied the transcriptome of M. tb replicating in human whole blood. To investigate if M. tb discriminates between the hematogenous environments of immunocompetent and immunodeficient individuals, we compared the M. tb transcriptional profiles during replication in blood from HIV- and HIV+ donors. Our results demonstrate that M. tb survives and replicates in blood from both HIV- and HIV+ donors and enhances its virulence/pathogenic potential in the hematogenous environment. The M. tb blood-specific transcriptome reflects suppression of dormancy, induction of cell-wall remodeling, alteration in mode of iron acquisition, potential evasion of immune surveillance, and enhanced expression of important virulence factors that drive active M. tb infection and dissemination. These changes are accentuated during bacterial replication in blood from HIV+ patients. Furthermore, the expression of ESAT-6, which participates in dissemination of M. tb from the lungs, is upregulated in M. tb growing in blood, especially during growth in blood from HIV+ patients. Preliminary experiments also demonstrate that ESAT-6 promotes HIV replication in U1 cells. These studies provide evidence, for the first time, that during bacteremia, M. tb can adapt to the blood environment by modifying its transcriptome in a manner indicative of an enhanced-virulence phenotype that favors active infection. Additionally, transcriptional modifications in HIV+ blood may further accentuate M. tb virulence and drive both M. tb and HIV infection.

Indexed as

Gene Expression ProfilingTranscription, GeneticAntigens, BacterialBacterial ProteinsBacterial Secretion SystemsCell WallGene Expression Regulation, PlantGenes, BacterialHIV-1HIV Core Protein p24HIV SeropositivityHumansIronMacrophagesMycobacterium tuberculosisOligonucleotide Array Sequence AnalysisAntigens, BacterialBacterial ProteinsBacterial Secretion SystemsESAT-6 protein, Mycobacterium tuberculosisHIV Core Protein p24IronRecombinant Proteins

Identifiers

PMID24755630
PMCPMC3995690
OpenAlexW2169170755

What OpenQuestion holds

Textmetadata
LicenceCC0
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.