Evidence map›Paper›PMID 24754678›Full record

ArticleJournal of the American Chemical Society2014

Spectroscopic and mechanistic studies of heterodimetallic forms of metallo-β-lactamase NDM-1.

Hao Yang, Mahesh Aitha, Amy R Marts, Alyssa Hetrick, Brian Bennett, Michael W Crowder, David L Tierney

Open access · bronzeAbstract read
In one paragraph

Article in Journal of the American Chemical Society, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 38 papers.

0numbers the graph read from it
0cells of the map it votes in
38citing papers in PubMed
3.2field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

38 citing papers in PubMed, 68 citations in OpenAlex.

  1. Article
  2. Functional dynamics of water in New Delhi metallo-β-lactamase catalysis.Protein science : a publication of the Protein Society · 2026
    Article
  3. Article
  4. Article
  5. Machine Learning Models Identify Inhibitors of New Delhi Metallo-β-lactamase.Journal of chemical information and modeling · 2024
    Article
  6. Article
  7. Article
  8. Review
  9. Review
  10. Article
  11. An integrated biophysical approach to discovering mechanisms of NDM-1 inhibition for several thiol-containing drugs.Journal of biological inorganic chemistry : JBIC : a publication of the Society of Biological Inorganic Chemistry · 2020
    Article
  12. Article
  13. Article
  14. Monitoring protein-metal binding byRSC medicinal chemistry · 2020
    Article
  15. Article
  16. Article
  17. Article
  18. Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Hao YangDepartment of Chemistry and Biochemistry, Miami University , Oxford, Ohio 45056, United States.
Mahesh Aitha
Amy R Marts
Alyssa Hetrick
Brian Bennett
Michael W Crowder
David L Tierney
Miami University · USMedical College of Wisconsin · US

Funding

TR&D Project 3P41EB001980 · NIBIB · MEDICAL COLLEGE OF WISCONSIN · PI KLUG, CANDICE S · 2003 to 2017
$16.3M
Case Center for Synchrotron BiosciencesP30EB009998 · NIBIB · CASE WESTERN RESERVE UNIVERSITY · PI CHANCE, MARK R · 2009 to 2018
$8.4M
Time-dependent structural studies on dinuclear metal ion containing enzymesR15GM093987 · NIGMS · MIAMI UNIVERSITY OXFORD · PI CROWDER, MICHAEL W, TIERNEY, DAVID L · 2010 to 2010
$426k
NIBIB NIH HHS EB001980NIBIB NIH HHS P30 EB009998NIBIB NIH HHS P30-EB-009998NIBIB NIH HHS P41 EB001980NIGMS NIH HHS GM093987NIGMS NIH HHS R15 GM093987
6 · The paper itself

Abstract

In an effort to characterize the roles of each metal ion in metallo-β-lactamase NDM-1, heterodimetallic analogues (CoCo-, ZnCo-, and CoCd-) of the enzyme were generated and characterized. UV-vis, (1)H NMR, EPR, and EXAFS spectroscopies were used to confirm the fidelity of the metal substitutions, including the presence of a homogeneous, heterodimetallic cluster, with a single-atom bridge. This marks the first preparation of a metallo-β-lactamase selectively substituted with a paramagnetic metal ion, Co(II), either in the Zn1 (CoCd-NDM-1) or in the Zn2 site (ZnCo-NDM-1), as well as both (CoCo-NDM-1). We then used these metal-substituted forms of the enzyme to probe the reaction mechanism, using steady-state and stopped-flow kinetics, stopped-flow fluorescence, and rapid-freeze-quench EPR. Both metal sites show significant effects on the kinetic constants, and both paramagnetic variants (CoCd- and ZnCo-NDM-1) showed significant structural changes on reaction with substrate. These changes are discussed in terms of a minimal kinetic mechanism that incorporates all of the data.

Indexed as

beta-LactamasesElectron Spin Resonance SpectroscopyMagnetic Resonance SpectroscopySpectrophotometry, UltravioletX-Ray Absorption Spectroscopybeta-lactamase NDM-1beta-Lactamases

Identifiers

PMID24754678
PMCPMC4046764
OpenAlexW2079115916

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.