Evidence map›Paper›PMID 24753571›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2014

A bimodular nuclear localization signal assembled via an extended double-stranded RNA-binding domain acts as an RNA-sensing signal for transportin 1.

Pierre Barraud, Silpi Banerjee, Weaam I Mohamed, Michael F Jantsch, Frédéric H-T Allain

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 57 papers.

0numbers the graph read from it
0cells of the map it votes in
57citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

57 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Review
  6. Article
  7. Article
  8. Article
  9. Review
  10. Article
  11. ADAR Family Proteins: A Structural Review.Current issues in molecular biology · 2024
    Review
  12. Article
  13. Review
  14. The role of ADAR1 through and beyond its editing activity in cancer.Cell communication and signaling : CCS · 2024
    Review
  15. Article
  16. Review
  17. Review
  18. Article
  19. Article
  20. RNA editing: Expanding the potential of RNA therapeutics.Molecular therapy : the journal of the American Society of Gene Therapy · 2023
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Pierre BarraudInstitute of Molecular Biology and Biophysics, Eidgenössiche Technische Hochschule Zürich, CH-8093 Zürich, Switzerland.
Silpi Banerjee
Weaam I Mohamed
Michael F Jantsch
Frédéric H-T Allain

Funding

Austrian Science Fund FWF I 404
6 · The paper itself

Abstract

The human RNA-editing enzyme adenosine deaminase acting on RNA (ADAR1) carries a unique nuclear localization signal (NLS) that overlaps one of its double-stranded RNA-binding domains (dsRBDs). This dsRBD-NLS is recognized by the nuclear import receptor transportin 1 (Trn1; also called karyopherin-β2) in an RNA-sensitive manner. Most Trn1 cargos bear a well-characterized proline-tyrosine-NLS, which is missing from the dsRBD-NLS. Here, we report the structure of the dsRBD-NLS, which reveals an unusual dsRBD fold extended by an additional N-terminal α-helix that brings the N- and C-terminal flanking regions in close proximity. We demonstrate experimentally that the atypical ADAR1-NLS is bimodular and is formed by the combination of the two flexible fragments flanking the folded domain. The intervening dsRBD acts only as an RNA-sensing scaffold, allowing the two NLS modules to be properly positioned for interacting with Trn1. We also provide a structural model showing how Trn1 can recognize the dsRBD-NLS and how dsRNA binding can interfere with Trn1 binding.

Indexed as

Active Transport, Cell NucleusAdenosine DeaminaseAmino Acid SequenceAmino Acid Substitutionbeta KaryopherinsHeLa CellsHumansModels, MolecularMolecular Sequence DataMutagenesis, Site-DirectedNuclear Localization SignalsNuclear Magnetic Resonance, BiomolecularProtein Interaction Domains and MotifsProtein Structure, SecondaryRecombinant Fusion ProteinsRNA-Binding ProteinsADARB1 protein, humanAdenosine Deaminasebeta KaryopherinsNuclear Localization SignalsRecombinant Fusion ProteinsRNA-Binding ProteinsRNA, Double-StrandedTNPO1 protein, humanNMRnucleocytoplasmic shuttlingRNA-binding proteinRNA deamination

Identifiers

PMID24753571
PMCPMC4020056

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.