Evidence map›Paper›PMID 24753568›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2014

Parallel independent evolution of pathogenicity within the genus Yersinia.

Sandra Reuter, Thomas R Connor, Lars Barquist, Danielle Walker, Theresa Feltwell, Simon R Harris, Maria Fookes, Miquette E Hall, Nicola K Petty, Thilo M Fuchs and 23 more

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 92 papers.

0numbers the graph read from it
0cells of the map it votes in
92citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

92 citing papers in PubMed.

  1. International journal of systematic and evolutionary microbiology · 2026
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  6. Survival and genomic stability ofFrontiers in cellular and infection microbiology · 2025
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  8. EAVLD 2024 - 7Italian journal of food safety · 2024
    Article
  9. Article
  10. Review
  11. Article
  12. Article
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  14. Article
  15. EnteroBase: hierarchical clustering of 100 000s of bacterial genomes into species/subspecies and populations.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2022
    Article
  16. The genus Serratia revisited by genomics.Nature communications · 2022
    Article
  17. Article
  18. Review
  19. Article
  20. Article

32 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

33 authors.

Sandra ReuterPathogen Research Group, Nottingham Trent University, Nottingham NG11 8NS, United Kingdom.
Thomas R Connor
Lars Barquist
Danielle Walker
Theresa Feltwell
Simon R Harris
Maria Fookes
Miquette E Hall
Nicola K Petty
Thilo M Fuchs
Jukka Corander
Muriel Dufour
Tamara Ringwood
Cyril Savin
Christiane Bouchier
Liliane Martin
Minna Miettinen
Mikhail Shubin
Julia M Riehm
Riikka Laukkanen-Ninios
Leila M Sihvonen
Anja Siitonen
Mikael Skurnik
Juliana Pfrimer Falcão
Hiroshi Fukushima
Holger C Scholz
Michael B Prentice
Brendan W Wren
Julian Parkhill
Elisabeth Carniel
Mark Achtman
Alan McNally
Nicholas R Thomson

Funding

Wellcome Trust 098051
6 · The paper itself

Abstract

The genus Yersinia has been used as a model system to study pathogen evolution. Using whole-genome sequencing of all Yersinia species, we delineate the gene complement of the whole genus and define patterns of virulence evolution. Multiple distinct ecological specializations appear to have split pathogenic strains from environmental, nonpathogenic lineages. This split demonstrates that contrary to hypotheses that all pathogenic Yersinia species share a recent common pathogenic ancestor, they have evolved independently but followed parallel evolutionary paths in acquiring the same virulence determinants as well as becoming progressively more limited metabolically. Shared virulence determinants are limited to the virulence plasmid pYV and the attachment invasion locus ail. These acquisitions, together with genomic variations in metabolic pathways, have resulted in the parallel emergence of related pathogens displaying an increasingly specialized lifestyle with a spectrum of virulence potential, an emerging theme in the evolution of other important human pathogens.

Indexed as

Evolution, MolecularGenome, BacterialHumansMetabolic Networks and PathwaysPhylogenySpecies SpecificityVirulenceYersiniaYersinia enterocoliticaEnterobacteriaceaegenomics metabolic streamliningpathoadaptation

Identifiers

PMID24753568
PMCPMC4020045

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.