Evidence map›Paper›PMID 24753416›Full record

ArticleNucleic acids research2014

HIV-1 Rev protein specifies the viral RNA export pathway by suppressing TAP/NXF1 recruitment.

Ichiro Taniguchi, Naoto Mabuchi, Mutsuhito Ohno

Open access · goldAbstract read
In one paragraph

Article in Nucleic acids research, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
1.6field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 35 citations in OpenAlex.

  1. Trial
  2. Trial
  3. Review
  4. Article
  5. Article
  6. Article
  7. Review
  8. Review
  9. Tuning Rex rules HTLV-1 pathogenesis.Frontiers in immunology · 2022
    Review
  10. Article
  11. Review
  12. Let It Go: HIV-1Journal of virology · 2021
    Review
  13. Review
  14. Article
  15. HIV Rev-isited.Open biology · 2020
    Review
  16. Article
  17. Article
  18. Article
  19. Multiple nuclear-replicating viruses require the stress-induced protein ZC3H11A for efficient growth.Proceedings of the National Academy of Sciences of the United States of America · 2018
    Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Ichiro TaniguchiInstitute for Virus Research, Kyoto University, Kyoto 606-8507, Japan itaniguc@virus.kyoto-u.ac.jp.
Naoto MabuchiInstitute for Virus Research, Kyoto University, Kyoto 606-8507, Japan.
Mutsuhito OhnoInstitute for Virus Research, Kyoto University, Kyoto 606-8507, Japan hitoohno@virus.kyoto-u.ac.jp.
Kyoto University · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Nuclear RNA export pathways in eukaryotes are often linked to the fate of a given RNA. Therefore, the choice of export pathway should be well-controlled to avoid an unfavorable effect on gene expression. Although some RNAs could be exported by more than one pathway, little is known about how the choice is regulated. This issue is highlighted when the human immunodeficiency virus type 1 (HIV-1) Rev protein induces the export of singly spliced and unspliced HIV-1 transcripts. How these RNAs are exported is not well understood because such transcripts should have the possibility of utilizing CRM1-dependent export via Rev or cellular TAP/NXF1-dependent export via the transcription/export (TREX) complex, or both. Here we found that Rev suppressed TAP/NXF1-dependent export of model RNA substrates that recapitulated viral transcripts. In this effect, Rev interacted with the cap-binding complex and inhibited the recruitment of the TREX complex. Thus, Rev controls the identity of the factor occupying the cap-proximal region that determines the RNA export pathway. This ribonucleoprotein remodeling activity of Rev may favor viral gene expression.

Indexed as

AnimalsDrosophila ProteinsExportin 1 ProteinFushi Tarazu Transcription FactorsHIV-1KaryopherinsNucleocytoplasmic Transport ProteinsOocytesReceptors, Cytoplasmic and Nuclearrev Gene Products, Human Immunodeficiency VirusRNA-Binding ProteinsRNA Cap-Binding ProteinsRNA SplicingRNA TransportRNA, ViralXenopusDrosophila ProteinsExportin 1 Proteinftz protein, DrosophilaFushi Tarazu Transcription FactorsKaryopherinsNucleocytoplasmic Transport ProteinsReceptors, Cytoplasmic and Nuclearrev Gene Products, Human Immunodeficiency Virusrev protein, Human Immunodeficiency Virus-1RNA-Binding ProteinsRNA Cap-Binding ProteinsRNA, Viral

Identifiers

PMID24753416
PMCPMC4041468
OpenAlexW2129593876

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.