Evidence map›Paper›PMID 24752974›Full record

ArticleJournal of the science of food and agriculture2014

Multipurpose assessment for the quantification of Vibrio spp. and total bacteria in fish and seawater using multiplex real-time polymerase chain reaction.

Ji Yeun Kim, Jung-Lim Lee

Open access · hybridAbstract readEvaluation Study
In one paragraph

Article in Journal of the science of food and agriculture, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
1.4field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 23 citations in OpenAlex.

  1. Article
  2. Detection of pathogenicItalian journal of food safety · 2024
    Article
  3. Article
  4. Article
  5. Association of gut microbiomes with lung and esophageal cancer: a pilot study.World journal of microbiology & biotechnology · 2021
    Article
  6. Applied and environmental microbiology · 2021
    Article
  7. Article
  8. Development of a rapid PCR protocol to detectJournal of food science and technology · 2018
    Article
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Ji Yeun KimDepartment of Human Ecology, Food Science, College of Agriculture and Related Sciences, Delaware State University, Dover, DE 19901, USA.
Jung-Lim Lee
Delaware State University · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundThis study describes the first multiplex real-time polymerase chain reaction assay developed, as a multipurpose assessment, for the simultaneous quantification of total bacteria and three Vibrio spp. (V. parahaemolyticus, V. vulnificus and V. anguillarum) in fish and seawater. The consumption of raw finfish as sushi or sashimi has been increasing the chance of Vibrio outbreaks in consumers. Freshness and quality of fishery products also depend on the total bacterial populations present.

resultsThe detection sensitivity of the specific targets for the multiplex assay was 1 CFU mL⁻¹ in pure culture and seawater, and 10 CFU g⁻¹ in fish. While total bacterial counts by the multiplex assay were similar to those obtained by cultural methods, the levels of Vibrio detected by the multiplex assay were generally higher than by cultural methods of the same populations. Among the natural samples without Vibrio spp. inoculation, eight out of 10 seawater and three out of 20 fish samples were determined to contain Vibrio spp.

conclusionOur data demonstrate that this multiplex assay could be useful for the rapid detection and quantification of Vibrio spp. and total bacteria as a multipurpose tool for surveillance of fish and water quality as well as diagnostic method.

Indexed as

AnimalsAquacultureAtlantic OceanColony Count, MicrobialConserved SequenceDatabases, Nucleic AcidDelawareDNA, BacterialDNA, RibosomalFishesFood InspectionGram-Negative BacteriaGram-Positive BacteriaMolecular TypingMultiplex Polymerase Chain ReactionReal-Time Polymerase Chain ReactionDNA, BacterialDNA, RibosomalRNA, Ribosomal, 16Sfishmultiplex real-time PCRseafood safetyseawatertotal bacteriaVibrio spp.

Identifiers

PMID24752974
PMCPMC4368387
OpenAlexW1602413553

What OpenQuestion holds

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LicenceCC BY-NC-ND
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.