Evidence map›Paper›PMID 24752897›Full record

ArticleMolecular and cellular biology2014

The histone variant MacroH2A1 regulates target gene expression in part by recruiting the transcriptional coregulator PELP1.

Kristine M Hussey, Hongshan Chen, Christine Yang, Eugene Park, Nasun Hah, Hediye Erdjument-Bromage, Paul Tempst, Matthew J Gamble, W Lee Kraus

Open access · bronzeAbstract read
In one paragraph

Article in Molecular and cellular biology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed, 1 pooled it
1.4field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 1 synthesis or guideline pooled it, 22 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 1 country.

Kristine M HusseyDepartment of Molecular Biology and Genetics, Cornell University, Ithaca, New York, USA Graduate Field of Biochemistry, Molecular and Cell Biology, Cornell University, Ithaca, New York, USA.
Hongshan ChenDepartment of Molecular Pharmacology, Albert Einstein College of Medicine, Bronx, New York, USA.
Christine YangDepartment of Molecular Biology and Genetics, Cornell University, Ithaca, New York, USA.
Eugene ParkDepartment of Molecular Biology and Genetics, Cornell University, Ithaca, New York, USA.
Nasun HahDepartment of Molecular Biology and Genetics, Cornell University, Ithaca, New York, USA Graduate Field of Biochemistry, Molecular and Cell Biology, Cornell University, Ithaca, New York, USA.
Hediye Erdjument-BromageMolecular Biology Program, Memorial Sloan-Kettering Cancer Center, New York, New York, USA.
Paul TempstMolecular Biology Program, Memorial Sloan-Kettering Cancer Center, New York, New York, USA.
Matthew J GambleDepartment of Molecular Biology and Genetics, Cornell University, Ithaca, New York, USA Department of Molecular Pharmacology, Albert Einstein College of Medicine, Bronx, New York, USA.
W Lee KrausDepartment of Molecular Biology and Genetics, Cornell University, Ithaca, New York, USA Graduate Field of Biochemistry, Molecular and Cell Biology, Cornell University, Ithaca, New York, USA Laboratory of Signaling and Gene Regulation, Cecil H. and Ida Green Center for Reproductive Biology Sciences, and Division of Basic Research, Department of Obstetrics and Gynecology, University of Texas Southwestern Medical Center, Dallas, Texas, USA matthew.gamble@einstein.yu.edu lee.kraus@utsouthwestern.edu.
Cornell University · USAlbert Einstein College of Medicine · USMemorial Sloan Kettering Cancer Center · USThe University of Texas Southwestern Medical Center · US

Funding

X-RAY CRYSTALLOGRAPHYP30CA008748 · NCI · SLOAN-KETTERING INSTITUTE FOR CANCER RES · PI Nicholas D Socci · 1985 to 2026
$347.4M
Dose-Dependent Effects of Hormone on the Activity of Estrogen Receptor Enhancers and Target GenesR01DK058110 · NIDDK · UT SOUTHWESTERN MEDICAL CENTER · PI WILLIAM Lee KRAUS · 2000 to 2026
$10.4M
The Role of PARP-1 in Hormone-Regulated TranscriptionR01DK069710 · NIDDK · UT SOUTHWESTERN MEDICAL CENTER · PI KRAUS, WILLIAM LEE · 2004 to 2025
$7.9M
The role of macroH2A variants in cancer and senescenceR01CA155232 · NCI · ALBERT EINSTEIN COLLEGE OF MEDICINE, INC · PI GAMBLE, MATTHEW J · 2012 to 2021
$3.7M
The Role of PARP-1 in Hormone-Regulated TranscriptionR56DK069710 · NIDDK · CORNELL UNIVERSITY · PI KRAUS, WILLIAM L · 2007 to 2007
$365k
Role of MacroH2A in Estrogen-Regulated Gene ExpressionF32DK079847 · NIDDK · CORNELL UNIVERSITY · PI GAMBLE, MATTHEW J · 2007 to 2009
$71k
NCI NIH HHS P30 CA008748NCI NIH HHS P30 CA08748NCI NIH HHS R01 CA155232NCI NIH HHS R01CA155232NIDDK NIH HHS DK069710NIDDK NIH HHS F32 DK079847NIDDK NIH HHS F32DK079847NIDDK NIH HHS R01 DK058110NIDDK NIH HHS R01 DK069710NIDDK NIH HHS R56 DK069710
6 · The paper itself

Abstract

MacroH2A1 is a histone variant harboring an ∼25-kDa carboxyl-terminal macrodomain. Due to its enrichment on the inactive X chromosome, macroH2A1 was thought to play a role in transcriptional repression. However, recent studies have shown that macroH2A1 occupies autosomal chromatin and regulates genes in a context-specific manner. The macrodomain may play a role in the modulation of gene expression outcomes via physical interactions with effector proteins, which may depend on the ability of the macrodomain to bind NAD(+) metabolite ligands. Here, we identify proline, glutamic acid, and leucine-rich protein 1 (PELP1), a chromatin-associated factor and transcriptional coregulator, as a ligand-independent macrodomain-interacting factor. We used chromatin immunoprecipitation coupled with tiling microarrays (ChIP-chip) to determine the genomic localization of PELP1 in MCF-7 human breast cancer cells. We find that PELP1 genomic localization is highly correlated with that of macroH2A1. Additionally, PELP1 positively correlates with heterochromatic chromatin marks and negatively correlates with active transcription marks, much like macroH2A1. MacroH2A1 specifically recruits PELP1 to the promoters of macroH2A1 target genes, but macroH2A1 occupancy occurs independent of PELP1. This recruitment allows macroH2A1 and PELP1 to cooperatively regulate gene expression outcomes.

Indexed as

Transcription, GeneticAnti-Bacterial AgentsCell Line, TumorChromatinChromatin ImmunoprecipitationCo-Repressor ProteinsDoxycyclineGene Expression RegulationHistonesHumansMCF-7 CellsOligonucleotide Array Sequence AnalysisPromoter Regions, GeneticProtein Structure, TertiaryReceptors, EstrogenRNA InterferenceAnti-Bacterial AgentsChromatinCo-Repressor ProteinsDoxycyclineHistonesmacroH2A histonePELP1 protein, humanReceptors, EstrogenRNA, Small InterferingTranscription Factors

Identifiers

PMID24752897
PMCPMC4054320
OpenAlexW2139811812

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.