Evidence map›Paper›PMID 24752895›Full record

ArticleMolecular and cellular biology2014

Dynamic estrogen receptor interactomes control estrogen-responsive trefoil Factor (TFF) locus cell-specific activities.

Justine Quintin, Christine Le Péron, Gaëlle Palierne, Maud Bizot, Stéphanie Cunha, Aurélien A Sérandour, Stéphane Avner, Catherine Henry, Frédéric Percevault, Marc-Antoine Belaud-Rotureau and 6 more

Open access · bronzeAbstract read
In one paragraph

Article in Molecular and cellular biology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
1.0field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 24 citations in OpenAlex.

  1. Article
  2. Review
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  8. The past and presence of gene targeting: from chemicals and DNA via proteins to RNA.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2018
    Review
  9. Signaling by Steroid Hormones in the 3D Nuclear Space.International journal of molecular sciences · 2018
    Review
  10. Article
  11. Article
  12. Article
  13. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 3 institutions in 1 country.

Justine QuintinEquipe SP@RTE, UMR CNRS 6290, Equipe Labellisée Ligue contre le Cancer, Université de Rennes I, Rennes, France.
Christine Le PéronEquipe SP@RTE, UMR CNRS 6290, Equipe Labellisée Ligue contre le Cancer, Université de Rennes I, Rennes, France.
Gaëlle PalierneEquipe SP@RTE, UMR CNRS 6290, Equipe Labellisée Ligue contre le Cancer, Université de Rennes I, Rennes, France.
Maud BizotEquipe SP@RTE, UMR CNRS 6290, Equipe Labellisée Ligue contre le Cancer, Université de Rennes I, Rennes, France.
Stéphanie CunhaEquipe SP@RTE, UMR CNRS 6290, Equipe Labellisée Ligue contre le Cancer, Université de Rennes I, Rennes, France.
Aurélien A SérandourEquipe SP@RTE, UMR CNRS 6290, Equipe Labellisée Ligue contre le Cancer, Université de Rennes I, Rennes, France.
Stéphane AvnerEquipe SP@RTE, UMR CNRS 6290, Equipe Labellisée Ligue contre le Cancer, Université de Rennes I, Rennes, France.
Catherine HenryCytogenetics and Cellular Biology Department, CHU, Rennes, France.
Frédéric PercevaultEquipe SP@RTE, UMR CNRS 6290, Equipe Labellisée Ligue contre le Cancer, Université de Rennes I, Rennes, France.
Marc-Antoine Belaud-RotureauCytogenetics and Cellular Biology Department, CHU, Rennes, France BIOSIT, UMR CNRS 6290, Université de Rennes I, Faculté de Médecine, Rennes, France.
Sébastien HuetEquipe SP@RTE, UMR CNRS 6290, Equipe Labellisée Ligue contre le Cancer, Université de Rennes I, Rennes, France.
Erwan WatrinEquipe CC, UMR CNRS 6290, Université de Rennes I, Faculté de Médecine, Rennes, France.
Jérôme EeckhouteEquipe SP@RTE, UMR CNRS 6290, Equipe Labellisée Ligue contre le Cancer, Université de Rennes I, Rennes, France INSERM U1011, Université Lille-Nord de France, Faculté de Médecine de Lille-Pôle Recherche, Lille, France.
Vincent LegagneuxEquipe EGD, UMR CNRS 6290, Université de Rennes I, Faculté de Médecine, Rennes, France.
Gilles SalbertEquipe SP@RTE, UMR CNRS 6290, Equipe Labellisée Ligue contre le Cancer, Université de Rennes I, Rennes, France.
Raphaël MétivierEquipe SP@RTE, UMR CNRS 6290, Equipe Labellisée Ligue contre le Cancer, Université de Rennes I, Rennes, France raphael.metivier@univ-rennes1.fr.
Centre National de la Recherche Scientifique · FRUniversité de Rennes · FRCentre Hospitalier Universitaire de Rennes · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Estradiol signaling is ideally suited for analyzing the molecular and functional linkages between the different layers of information directing transcriptional regulations: the DNA sequence, chromatin modifications, and the spatial organization of the genome. Hence, the estrogen receptor (ER) can bind at a distance from its target genes and engages timely and spatially coordinated processes to regulate their expression. In the context of the coordinated regulation of colinear genes, identifying which ER binding sites (ERBSs) regulate a given gene still remains a challenge. Here, we investigated the coordination of such regulatory events at a 2-Mb genomic locus containing the estrogen-sensitive trefoil factor (TFF) cluster of genes in breast cancer cells. We demonstrate that this locus exhibits a hormone- and cohesin-dependent reduction in the plasticity of its three-dimensional organization that allows multiple ERBSs to be dynamically brought to the vicinity of estrogen-sensitive genes. Additionally, by using triplex-forming oligonucleotides, we could precisely document the functional links between ER engagement at given ERBSs and the regulation of particular genes. Hence, our data provide evidence of a formerly suggested cooperation of enhancers toward gene regulation and also show that redundancy between ERBSs can occur.

Indexed as

Gene Expression RegulationBinding SitesBreast NeoplasmsCCCTC-Binding FactorCell Cycle ProteinsCell Line, TumorChromatin ImmunoprecipitationChromosomal Proteins, Non-HistoneCohesinsDNA-Binding ProteinsEstrogensFemaleHumansIn Situ Hybridization, FluorescenceMCF-7 CellsMultiplex Polymerase Chain ReactionCCCTC-Binding FactorCell Cycle ProteinsChromosomal Proteins, Non-HistoneCohesinsCTCF protein, humanDNA-Binding ProteinsEstrogensNuclear ProteinsOligonucleotidesPeptidesPhosphoproteinsRAD21 protein, humanReceptors, EstrogenRepressor ProteinsRNA, Small InterferingTrefoil Factor-2

Identifiers

PMID24752895
PMCPMC4054307
OpenAlexW2058346241

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.