Evidence map›Paper›PMID 24752300›Full record

ArticleThe Journal of experimental medicine2014

Elucidation of the enigmatic IgD class-switch recombination via germline deletion of the IgH 3' regulatory region.

Pauline Rouaud, Alexis Saintamand, Faten Saad, Claire Carrion, Sandrine Lecardeur, Michel Cogné, Yves Denizot

Open access · bronzeAbstract read
In one paragraph

Article in The Journal of experimental medicine, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 39 papers.

0numbers the graph read from it
0cells of the map it votes in
39citing papers in PubMed
3.1field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

39 citing papers in PubMed, 66 citations in OpenAlex.

  1. Article
  2. Orientation Regulation of Class-switch Recombination in Human B Cells.Journal of immunology (Baltimore, Md. : 1950) · 2024
    Article
  3. Review
  4. Teleost IgDiScience · 2023
    Article
  5. B cells defined by immunoglobulin isotypes.Clinical and experimental immunology · 2022
    Article
  6. Article
  7. Review
  8. Review
  9. Article
  10. Article
  11. Article
  12. Review
  13. Review
  14. Review
  15. Article
  16. Teleost IgDCell reports · 2019
    Article
  17. Article
  18. Article
  19. Article
  20. The enigmatic function of IgD: some answers at last.European journal of immunology · 2018
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 1 country.

Pauline RouaudUMR CNRS 7276, Centre National de la Recherche Scientifique, Université de Limoges, 87025 Limoges, France.
Alexis Saintamand
Faten Saad
Claire Carrion
Sandrine Lecardeur
Michel Cogné
Yves Denizot
Université de Limoges · FRCentre National de la Recherche Scientifique · FRInstitut Universitaire de France · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Classical class-switch recombination (cCSR) substitutes the Cμ gene with Cγ, Cε, or Cα, thereby generating IgG, IgE, or IgA classes, respectively. This activation-induced deaminase (AID)-driven process is controlled by the IgH 3' regulatory region (3'RR). Regulation of rare IgD CSR events has been enigmatic. We show that μδCSR occurs in mouse mesenteric lymph node (MLN) B cells and is AID-dependent. AID attacks differ from those in cCSR because they are not accompanied by extensive somatic hypermutation (SHM) of targeted regions and because repaired junctions exhibit features of the alternative end-joining (A-EJ) pathway. In contrast to cCSR and SHM, μδCSR is 3'RR-independent, as its absence affects neither breakpoint locations in Sμ- and Sδ-like (σ(δ)) nor mutation patterns at Sμ-σ(δ) junctions. Although mutations occur in the immediate proximity of the μδ junctions, SHM is absent distal to the junctions within both Sμ and rearranged VDJ regions. In conclusion, μδCSR is active in MLNs, occurs independently of 3'RR-driven assembly, and is even dramatically increased in 3'RR-deficient mice, further showing that its regulation differs from cCSR.

Indexed as

AICDA (Activation-Induced Cytidine Deaminase)AnimalsBase SequenceBlotting, SouthernB-LymphocytesCloning, MolecularCytidine DeaminaseDNA PrimersGerm-Line MutationImmunoglobulin Class SwitchingImmunoglobulin DImmunoglobulin Heavy ChainsImmunohistochemistryLymph NodesMiceMolecular Sequence DataAICDA (Activation-Induced Cytidine Deaminase)Cytidine DeaminaseDNA PrimersImmunoglobulin DImmunoglobulin Heavy Chains

Identifiers

PMID24752300
PMCPMC4010897
OpenAlexW2148303798

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.