Evidence map›Paper›PMID 24748612›Full record

ArticleJournal of bacteriology2014

Streptococcus mutans extracellular DNA is upregulated during growth in biofilms, actively released via membrane vesicles, and influenced by components of the protein secretion machinery.

Sumei Liao, Marlise I Klein, Kyle P Heim, Yuwei Fan, Jacob P Bitoun, San-Joon Ahn, Robert A Burne, Hyun Koo, L Jeannine Brady, Zezhang T Wen

Open access · bronzeAbstract read
In one paragraph

Article in Journal of bacteriology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 171 papers.

0numbers the graph read from it
0cells of the map it votes in
171citing papers in PubMed
22.1field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

171 citing papers in PubMed, 307 citations in OpenAlex.

  1. The role of extracellular DNA inJournal of bacteriology · 2026
    Review
  2. Imaging nucleic acids in biofilms.Essays in biochemistry · 2026
    Review
  3. Article
  4. Review
  5. Membrane Vesicles ImproveMicroorganisms · 2026
    Article
  6. Review
  7. Raman signatures ofFrontiers in microbiology · 2026
    Article
  8. Article
  9. Recent advances in membrane vesicles ofJournal of oral microbiology · 2026
    Review
  10. Review
  11. Review
  12. Article
  13. Review
  14. Article
  15. Article
  16. Optimization of the Purification Process forJournal of microbiology and biotechnology · 2025
    Article
  17. Review
  18. Article
  19. Article
  20. Article

111 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 1 country.

Sumei LiaoCenter of Excellence in Oral and Craniofacial Biology, School of Dentistry, Louisiana State University Health Sciences Center, New Orleans, Louisiana, USA.
Marlise I KleinCenter for Oral Biology, University of Rochester School of Medicine and Dentistry, Rochester, New York, USA.
Kyle P HeimDepartment of Oral Biology, University of Florida School of Dentistry, Gainesville, Florida, USA.
Yuwei FanDepartment of Comprehensive Dentistry and Biomaterials, School of Dentistry, Louisiana State University Health Sciences Center, New Orleans, Louisiana, USA.
Jacob P BitounCenter of Excellence in Oral and Craniofacial Biology, School of Dentistry, Louisiana State University Health Sciences Center, New Orleans, Louisiana, USA.
San-Joon AhnDepartment of Oral Biology, University of Florida School of Dentistry, Gainesville, Florida, USA.
Robert A BurneDepartment of Oral Biology, University of Florida School of Dentistry, Gainesville, Florida, USA.
Hyun KooDepartment of Orthodontics, University of Pennsylvania School of Dental Medicine, Philadelphia, Pennsylvania, USA.
L Jeannine BradyDepartment of Oral Biology, University of Florida School of Dentistry, Gainesville, Florida, USA.
Zezhang T WenCenter of Excellence in Oral and Craniofacial Biology, School of Dentistry, Louisiana State University Health Sciences Center, New Orleans, Louisiana, USA Department of Comprehensive Dentistry and Biomaterials, School of Dentistry, Louisiana State University Health Sciences Center, New Orleans, Louisiana, USA Department of Microbiology, Immunology, and Parasitology, School of Medicine, Louisiana State University Health Sciences Center, New Orleans, Louisiana, USA zwen@lsuhsc.edu.
Louisiana State University Health Sciences Center New Orleans · USUniversity of Florida · USUniversity of Pennsylvania · USUniversity of Rochester · US

Funding

MEMBRANES OF THE DENTAL PATHOGEN STREPTOCOCCUS MUTANSR01DE008007 · NIDCR · UNIVERSITY OF FLORIDA · PI L. Jeannine Brady, Surabhi Mishra · 1986 to 2026
$8.6M
Comprehensive Training Program in Oral BiologyT90DE021990 · NIDCR · UNIVERSITY OF FLORIDA · PI Jose A Lemos · 2011 to 2026
$8.2M
BrpA in Virulence Modulation of Streptococcus mutansR01DE019452 · NIDCR · LSU HEALTH SCIENCES CENTER · PI ZEZHANG TOM WEN, Hui Wu · 2009 to 2026
$6.3M
Role of the Spx Regulator in Streptococcus mutansR01DE019783 · NIDCR · UNIVERSITY OF ROCHESTER · PI LEMOS, JOSE A · 2010 to 2020
$3.7M
Functional Amyloid Formation in Streptococcus mutansR01DE021789 · NIDCR · UNIVERSITY OF FLORIDA · PI BRADY, L. JEANNINE, LONG, JOANNA R · 2012 to 2021
$3.7M
Training Program in Oral ScienceR90DE022529 · NIDCR · UNIVERSITY OF ROCHESTER · PI OVITT, CATHERINE, YULE, DAVID I · 2011 to 2021
$877k
MEMBRANES OF THE DENTAL PATHOGEN STREPTOCOCCUS MUTANSR37DE008007 · NIDCR · UNIVERSITY OF FLORIDA · PI BLEIWEIS, ARNOLD S. · 1988 to 1997
–
NIDCR NIH HHS DE08007NIDCR NIH HHS DE19452NIDCR NIH HHS DE21789NIDCR NIH HHS DE22529NIDCR NIH HHS R01 DE008007NIDCR NIH HHS R01 DE019452NIDCR NIH HHS R01 DE019783NIDCR NIH HHS R01 DE021789NIDCR NIH HHS R90 DE022529NIDCR NIH HHS T90 DE021990
6 · The paper itself

Abstract

Streptococcus mutans, a major etiological agent of human dental caries, lives primarily on the tooth surface in biofilms. Limited information is available concerning the extracellular DNA (eDNA) as a scaffolding matrix in S. mutans biofilms. This study demonstrates that S. mutans produces eDNA by multiple avenues, including lysis-independent membrane vesicles. Unlike eDNAs from cell lysis that were abundant and mainly concentrated around broken cells or cell debris with floating open ends, eDNAs produced via the lysis-independent pathway appeared scattered but in a structured network under scanning electron microscopy. Compared to eDNA production of planktonic cultures, eDNA production in 5- and 24-h biofilms was increased by >3- and >1.6-fold, respectively. The addition of DNase I to growth medium significantly reduced biofilm formation. In an in vitro adherence assay, added chromosomal DNA alone had a limited effect on S. mutans adherence to saliva-coated hydroxylapatite beads, but in conjunction with glucans synthesized using purified glucosyltransferase B, the adherence was significantly enhanced. Deletion of sortase A, the transpeptidase that covalently couples multiple surface-associated proteins to the cell wall peptidoglycan, significantly reduced eDNA in both planktonic and biofilm cultures. Sortase A deficiency did not have a significant effect on membrane vesicle production; however, the protein profile of the mutant membrane vesicles was significantly altered, including reduction of adhesin P1 and glucan-binding proteins B and C. Relative to the wild type, deficiency of protein secretion and membrane protein insertion machinery components, including Ffh, YidC1, and YidC2, also caused significant reductions in eDNA.

Indexed as

BiofilmsCell MembraneDNA, BacterialGene Expression Regulation, BacterialProtein BiosynthesisStreptococcus mutansUp-RegulationDNA, Bacterial

Identifiers

PMID24748612
PMCPMC4054167
OpenAlexW2155050787

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.