Evidence map›Paper›PMID 24748175›Full record

ArticlePloS one2014

Highly specific contractions of a single CAG/CTG trinucleotide repeat by TALEN in yeast.

Guy-Franck Richard, David Viterbo, Varun Khanna, Valentine Mosbach, Lauriane Castelain, Bernard Dujon

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 35 papers.

0numbers the graph read from it
0cells of the map it votes in
35citing papers in PubMed
2.6field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

35 citing papers in PubMed, 59 citations in OpenAlex.

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  10. Application of CRISPR-Cas9-Mediated Genome Editing for the Treatment of Myotonic Dystrophy Type 1.Molecular therapy : the journal of the American Society of Gene Therapy · 2020
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  16. CRISPR/Cas Applications in Myotonic Dystrophy: Expanding Opportunities.International journal of molecular sciences · 2019
    Review
  17. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 1 country.

Guy-Franck RichardInstitut Pasteur, Unité de Génétique Moléculaire des Levures, Département Génomes & Génétique, Paris, France; Sorbonne Universités, UPMC Univ Paris 6, IFD, Paris, France; CNRS, UMR3525, Paris, France.
David ViterboInstitut Pasteur, Unité de Génétique Moléculaire des Levures, Département Génomes & Génétique, Paris, France; Sorbonne Universités, UPMC Univ Paris 6, IFD, Paris, France; CNRS, UMR3525, Paris, France.
Varun KhannaInstitut Pasteur, Unité de Génétique Moléculaire des Levures, Département Génomes & Génétique, Paris, France; Sorbonne Universités, UPMC Univ Paris 6, IFD, Paris, France; CNRS, UMR3525, Paris, France.
Valentine MosbachInstitut Pasteur, Unité de Génétique Moléculaire des Levures, Département Génomes & Génétique, Paris, France; Sorbonne Universités, UPMC Univ Paris 6, IFD, Paris, France; CNRS, UMR3525, Paris, France.
Lauriane CastelainInstitut Pasteur, Unité de Génétique Moléculaire des Levures, Département Génomes & Génétique, Paris, France; Sorbonne Universités, UPMC Univ Paris 6, IFD, Paris, France; CNRS, UMR3525, Paris, France.
Bernard DujonInstitut Pasteur, Unité de Génétique Moléculaire des Levures, Département Génomes & Génétique, Paris, France; Sorbonne Universités, UPMC Univ Paris 6, IFD, Paris, France; CNRS, UMR3525, Paris, France.
Sorbonne Université · FRInstitut Pasteur · FRCentre National de la Recherche Scientifique · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Trinucleotide repeat expansions are responsible for more than two dozens severe neurological disorders in humans. A double-strand break between two short CAG/CTG trinucleotide repeats was formerly shown to induce a high frequency of repeat contractions in yeast. Here, using a dedicated TALEN, we show that induction of a double-strand break into a CAG/CTG trinucleotide repeat in heterozygous yeast diploid cells results in gene conversion of the repeat tract with near 100% efficacy, deleting the repeat tract. Induction of the same TALEN in homozygous yeast diploids leads to contractions of both repeats to a final length of 3-13 triplets, with 100% efficacy in cells that survived the double-strand breaks. Whole-genome sequencing of surviving yeast cells shows that the TALEN does not increase mutation rate. No other CAG/CTG repeat of the yeast genome showed any length alteration or mutation. No large genomic rearrangement such as aneuploidy, segmental duplication or translocation was detected. It is the first demonstration that induction of a TALEN in an eukaryotic cell leads to shortening of trinucleotide repeat tracts to lengths below pathological thresholds in humans, with 100% efficacy and very high specificity.

Indexed as

Trinucleotide Repeat ExpansionTrinucleotide RepeatsDNA Breaks, Double-StrandedFungal ProteinsGenotypeKaryotypeMutation RateSequence Analysis, DNASequence DeletionYeastsFungal Proteins

Identifiers

PMID24748175
PMCPMC3991675
OpenAlexW2009446131

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.