Evidence map›Paper›PMID 24748066›Full record

ArticleProtoplasma2014

Expression response of duplicated metallothionein 3 gene to copper stress in Silene vulgaris ecotypes.

Eva Nevrtalova, Jiri Baloun, Vojtech Hudzieczek, Radim Cegan, Boris Vyskot, Jaroslav Dolezel, Jan Safar, David Milde, Roman Hobza

Open access · greenAbstract read
PubMed Publisher
In one paragraph

Article in Protoplasma, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.7field-weighted citation impact, top 29% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 14 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 1 country.

Eva NevrtalovaDepartment of Plant Developmental Genetics, Institute of Biophysics, Academy of Sciences of the Czech Republic, v.v.i., Kralovopolska 135, 612 65, Brno, Czech Republic, nevrtalova@ibp.cz.
Jiri Baloun
Vojtech Hudzieczek
Radim Cegan
Boris Vyskot
Jaroslav Dolezel
Jan Safar
David Milde
Roman Hobza
Czech Academy of Sciences, Institute of Biophysics · CZCzech Academy of Sciences, Institute of Experimental Botany · CZRegional Centre of Advanced Technologies and Materials · CZ

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Metallothioneins (MTs) were identified as important players in metal metabolism. MT3 gene presents a key metallothionein controlling copper homeostasis in plants. We have selected one cupricolous and one non-cupricolous ecotype to isolate and analyse the MT3 gene in Silene vulgaris. For expression data comparison, we have also included other metal-tolerant ecotypes. Based on a S. vulgaris BAC library screening, we have identified and sequenced a genomic clone containing MT3 gene (SvMT3). We found that SvMT3 gene has been locally duplicated in a tandem arrangement. Expression analysis and complementation studies using yeast mutants showed that both copies of the SvMT3 gene were functional. Moreover, we examined the expression of MT3 gene(s) in selected ecotypes under different copper treatments to show the tissue-specific expression response to copper stress. We demonstrated that higher copper concentrations specifically affected MT3 expression among ecotypes. Our analysis shows that MT3a has similar expression pattern in cupricolous ecotypes while MT3b has common expression features shared by all metallophyte S. vulgaris ecotypes. Our data indicate that down-regulation of MT3b root expression in higher copper concentrations is associated with copper stress. We propose that there might be a specific regulation of SvMT3s transcription depending on the type of heavy metal tolerance.

Indexed as

EcotypeGenes, DuplicateGenes, PlantAdaptation, PhysiologicalArabidopsisCopperGene Expression Regulation, PlantHydrogen PeroxideMetallothionein 3Molecular Sequence DataNerve Tissue ProteinsPlant RootsReal-Time Polymerase Chain ReactionSaccharomyces cerevisiaeSileneCopperHydrogen PeroxideMetallothionein 3Nerve Tissue Proteins

Identifiers

PMID24748066
OpenAlexW2050975996

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.