ArticleApplied and environmental microbiology2014
Insights into the microbial degradation of rubber and gutta-percha by analysis of the complete genome of Nocardia nova SH22a.
Article in Applied and environmental microbiology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.
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Who cites it
28 citing papers in PubMed, 59 citations in OpenAlex.
- Discovery of Genetically Distinct, Sympatric Coral Lineages With Temporal but Not Gametic Reproductive Isolation.Molecular ecology · 2025Article
- Cleavage of natural rubber by rubber oxygenases in Gram-negative bacteria.Applied microbiology and biotechnology · 2024Review
- Genomic insights intoFrontiers in microbiology · 2024Article
- Assembly strategies for rubber-degrading microbial consortia based on omics tools.Frontiers in bioengineering and biotechnology · 2023Review
- Updated Review onClinical microbiology reviews · 2022Review
- Characterization of Latex-Clearing Protein and Aldehyde Dehydrogenases Involved in the Utilization of poly(cis-1,4-isoprene) by Nocardia farcinica NBRC 15532Microorganisms · 2022Article
- Comparative Genomics of Closely-RelatedViruses · 2022Article
- Whole-Genome Shotgun (WGS) Sequence ofMicrobiology resource announcements · 2022Article
- Nocardia noduli sp. nov., a novel actinobacterium with biotechnological potential.Archives of microbiology · 2022Article
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- Rubber Degrading Strains:Polymers · 2021Article
- Microbial Degradation of Rubber: Actinobacteria.Polymers · 2021Review
- Microbial risk assessment ofComputational and structural biotechnology journal · 2021Article
- Insights from the comparative genome analysis of natural rubber degradingBioinformation · 2021Article
- Characterization of the genes responsible for rubber degradation in Actinoplanes sp. strain OR16.Applied microbiology and biotechnology · 2020Article
- New Nocobactin Derivatives with Antimuscarinic Activity, Terpenibactins A-C, Revealed by Genome Mining of Nocardia terpenica IFM 0406.Chembiochem : a European journal of chemical biology · 2020Article
- First report of cis-1,4-polyisoprene degradation by Gordonia paraffinivorans.Brazilian journal of microbiology : [publication of the Brazilian Society for Microbiology] · 2019Article
- Response of bacterial communities in rubber plantations to different fertilizer treatments.3 Biotech · 2019Article
- Bioactive molecules from Nocardia: diversity, bioactivities and biosynthesis.Journal of industrial microbiology & biotechnology · 2019Review
Corrections and comments
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Authors and funding
5 authors at 3 institutions in 2 countries.
Funding
No grant is acknowledged in the PubMed record.
Abstract
The complete genome sequence of Nocardia nova SH22a was determined in light of the remarkable ability of rubber and gutta-percha (GP) degradation of this strain. The genome consists of a circular chromosome of 8,348,532 bp with a G+C content of 67.77% and 7,583 predicted protein-encoding genes. Functions were assigned to 72.45% of the coding sequences. Among them, a large number of genes probably involved in the metabolism of xenobiotics and hardly degradable compounds, as well as genes that participate in the synthesis of polyketide- and/or nonribosomal peptide-type secondary metabolites, were detected. Based on in silico analyses and experimental studies, such as transposon mutagenesis and directed gene deletion studies, the pathways of rubber and GP degradation were proposed and the relationship between both pathways was unraveled. The genes involved include, inter alia, genes participating in cell envelope synthesis (long-chain-fatty-acid-AMP ligase and arabinofuranosyltransferase), β-oxidation (α-methylacyl-coenzyme A [α-methylacyl-CoA] racemase), propionate catabolism (acyl-CoA carboxylase), gluconeogenesis (phosphoenolpyruvate carboxykinase), and transmembrane substrate uptake (Mce [mammalian cell entry] transporter). This study not only improves our insights into the mechanism of microbial degradation of rubber and GP but also expands our knowledge of the genus Nocardia regarding metabolic diversity.
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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.