Evidence map›Paper›PMID 24745046›Full record

ArticleMolecular plant pathology2014

Ralstonia solanacearum type III secretion system effector Rip36 induces a hypersensitive response in the nonhost wild eggplant Solanum torvum.

Kamrun Nahar, Iyo Matsumoto, Fumiko Taguchi, Yoshishige Inagaki, Mikihiro Yamamoto, Kazuhiro Toyoda, Tomonori Shiraishi, Yuki Ichinose, Takafumi Mukaihara

Open access · greenAbstract read
In one paragraph

Article in Molecular plant pathology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed
4.2field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed, 56 citations in OpenAlex.

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  15. Review
  16. International journal of molecular sciences · 2020
    Article
  17. Article
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  19. Article
  20. Complete Genome Sequence of Sequevar 14MFrontiers in microbiology · 2019
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 2 countries.

Kamrun Nahar
Iyo Matsumoto
Fumiko Taguchi
Yoshishige Inagaki
Mikihiro Yamamoto
Kazuhiro Toyoda
Tomonori Shiraishi
Yuki Ichinose
Takafumi Mukaihara
Okayama University of Science · JPOkayama University · JPInstitute for Biological Sciences · CA

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Ralstonia solanacearum is a Gram-negative soil-borne bacterium that causes bacterial wilt disease in more than 200 plant species, including economically important Solanaceae species. In R. solanacearum, the hypersensitive response and pathogenicity (Hrp) type III secretion system is required for both the ability to induce the hypersensitive response (HR) in nonhost plants and pathogenicity in host plants. Recently, 72 effector genes, called rip (Ralstonia protein injected into plant cells), have been identified in R. solanacearum RS1000. RS1002, a spontaneous nalixidic acid-resistant derivative of RS1000, induced strong HR in the nonhost wild eggplant Solanum torvum in an Hrp-dependent manner. An Agrobacterium-mediated transient expression system revealed that Rip36, a putative Zn-dependent protease effector of R. solanacearum, induced HR in S. torvum. A mutation in the putative Zn-binding motif (E149A) completely abolished the ability to induce HR. In agreement with this result, the RS1002-derived Δrip36 and rip36E149A mutants lost the ability to induce HR in S. torvum. An E149A mutation had no effect on the translocation of Rip36 into plant cells. These results indicate that Rip36 is an avirulent factor that induces HR in S. torvum and that a putative Zn-dependent protease motif is essential for this activity.

Indexed as

Bacterial Secretion SystemsAgrobacteriumBacterial ProteinsMutationPlant LeavesProtein StabilityRalstonia solanacearumSolanumBacterial ProteinsBacterial Secretion Systems

Identifiers

PMID24745046
PMCPMC6638889
OpenAlexW1550109899

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.