ArticleInternational journal of genomics2014
The WRKY Transcription Factor Genes in Lotus japonicus.
Article in International journal of genomics, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.
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Who cites it
19 citing papers in PubMed, 36 citations in OpenAlex.
- Genome-wide identification and comparative expression profiling of the WRKY transcription factor family in two Citrus species with different Candidatus Liberibacter asiaticus susceptibility.BMC plant biology · 2023Article
- Role of WRKY Transcription Factors in Regulation of Abiotic Stress Responses in Cotton.Life (Basel, Switzerland) · 2022Review
- Characterization ofFrontiers in plant science · 2022Article
- Genome-wide identification and expression analysis of the WRKY transcription factor family in flax (Linum usitatissimum L.).BMC genomics · 2021Article
- Stress-regulated elements inPeerJ · 2021Article
- Identification and expression analysis of WRKY gene family under drought stress in peanut (Arachis hypogaea L.).PloS one · 2020Article
- Genome-Wide Analysis of Members of the WRKY Gene Family and Their Cold Stress Response in Prunus mume.Genes · 2019Article
- Genome-wide identification and expression analyses of WRKY transcription factor family members from chickpea (Cicer arietinum L.) reveal their role in abiotic stress-responses.Genes & genomics · 2019Article
- Comparative genome-wide analysis of WRKY transcription factors in two Asian legume crops: Adzuki bean and Mung bean.Scientific reports · 2018Article
- WRKY transcription factors in legumes.BMC plant biology · 2018Article
- Transcriptome-wide identification and screening of WRKY factors involved in the regulation of taxol biosynthesis in Taxus chinensis.Scientific reports · 2018Article
- A Genome-Wide Identification of the WRKY Family Genes and a Survey of Potential WRKY Target Genes in Dendrobium officinale.Scientific reports · 2017Article
- Article
- Genome-Wide Investigation of WRKY Transcription Factors Involved in Terminal Drought Stress Response in Common Bean.Frontiers in plant science · 2017Article
- Novel Genomic and Evolutionary Insight of WRKY Transcription Factors in Plant Lineage.Scientific reports · 2016Article
- Genome-wide Identification and Structural, Functional and Evolutionary Analysis of WRKY Components of Mulberry.Scientific reports · 2016Article
- Global Analysis of WRKY Genes and Their Response to Dehydration and Salt Stress in Soybean.Frontiers in plant science · 2016Article
- Genome-Wide Identification and Characterization of WRKY Gene Family in Peanut.Frontiers in plant science · 2016Article
- The WRKY transcription factor genes in eggplant (Solanum melongena L.) and Turkey Berry (Solanum torvum Sw.).International journal of molecular sciences · 2015Article
Corrections and comments
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Authors and funding
4 authors at 2 institutions in 1 country.
Funding
No grant is acknowledged in the PubMed record.
Abstract
WRKY transcription factor genes play critical roles in plant growth and development, as well as stress responses. WRKY genes have been examined in various higher plants, but they have not been characterized in Lotus japonicus. The recent release of the L. japonicus whole genome sequence provides an opportunity for a genome wide analysis of WRKY genes in this species. In this study, we identified 61 WRKY genes in the L. japonicus genome. Based on the WRKY protein structure, L. japonicus WRKY (LjWRKY) genes can be classified into three groups (I-III). Investigations of gene copy number and gene clusters indicate that only one gene duplication event occurred on chromosome 4 and no clustered genes were detected on chromosomes 3 or 6. Researchers previously believed that group II and III WRKY domains were derived from the C-terminal WRKY domain of group I. Our results suggest that some WRKY genes in group II originated from the N-terminal domain of group I WRKY genes. Additional evidence to support this hypothesis was obtained by Medicago truncatula WRKY (MtWRKY) protein motif analysis. We found that LjWRKY and MtWRKY group III genes are under purifying selection, suggesting that WRKY genes will become increasingly structured and functionally conserved.
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Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.