Evidence map›Paper›PMID 24744574›Full record

ReviewWorld journal of gastroenterology2014

Proteomics for discovery of candidate colorectal cancer biomarkers.

Paula Alvarez-Chaver, Olalla Otero-Estévez, María Páez de la Cadena, Francisco J Rodríguez-Berrocal, Vicenta S Martínez-Zorzano

Open access · bronzeAbstract readReview
In one paragraph

Review in World journal of gastroenterology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 39 papers.

0numbers the graph read from it
0cells of the map it votes in
39citing papers in PubMed
7.2field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

39 citing papers in PubMed, 79 citations in OpenAlex.

  1. Review
  2. Review
  3. Article
  4. Review
  5. Article
  6. Article
  7. Review
  8. Review
  9. Article
  10. Article
  11. Review
  12. Article
  13. Article
  14. Article
  15. Review
  16. Article
  17. Gene screening of colorectal cancers via network analysis.Gastroenterology and hepatology from bed to bench · 2019
    Article
  18. Article
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Paula Alvarez-ChaverPaula Álvarez-Chaver, Unidad de Proteómica, Servicio de Determinación Estructural, Proteómica y Genómica, Centro de Apoyo Científico y Tecnológico a la Investigación, Universidad de Vigo, Campus As Lagoas-Marcosende, 36310 Vigo (Pontevedra), Spain.
Olalla Otero-EstévezPaula Álvarez-Chaver, Unidad de Proteómica, Servicio de Determinación Estructural, Proteómica y Genómica, Centro de Apoyo Científico y Tecnológico a la Investigación, Universidad de Vigo, Campus As Lagoas-Marcosende, 36310 Vigo (Pontevedra), Spain.
María Páez de la CadenaPaula Álvarez-Chaver, Unidad de Proteómica, Servicio de Determinación Estructural, Proteómica y Genómica, Centro de Apoyo Científico y Tecnológico a la Investigación, Universidad de Vigo, Campus As Lagoas-Marcosende, 36310 Vigo (Pontevedra), Spain.
Francisco J Rodríguez-BerrocalPaula Álvarez-Chaver, Unidad de Proteómica, Servicio de Determinación Estructural, Proteómica y Genómica, Centro de Apoyo Científico y Tecnológico a la Investigación, Universidad de Vigo, Campus As Lagoas-Marcosende, 36310 Vigo (Pontevedra), Spain.
Vicenta S Martínez-ZorzanoPaula Álvarez-Chaver, Unidad de Proteómica, Servicio de Determinación Estructural, Proteómica y Genómica, Centro de Apoyo Científico y Tecnológico a la Investigación, Universidad de Vigo, Campus As Lagoas-Marcosende, 36310 Vigo (Pontevedra), Spain.
Universidade de Vigo · ES

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Colorectal cancer (CRC) is the second most common cause of cancer-related deaths in Europe and other Western countries, mainly due to the lack of well-validated clinically useful biomarkers with enough sensitivity and specificity to detect this disease at early stages. Although it is well known that the pathogenesis of CRC is a progressive accumulation of mutations in multiple genes, much less is known at the proteome level. Therefore, in the last years many proteomic studies have been conducted to find new candidate protein biomarkers for diagnosis, prognosis and as therapeutic targets for this malignancy, as well as to elucidate the molecular mechanisms of colorectal carcinogenesis. An important advantage of the proteomic approaches is the capacity to look for multiple differentially expressed proteins in a single study. This review provides an overview of the recent reports describing the different proteomic tools used for the discovery of new protein markers for CRC such as two-dimensional electrophoresis methods, quantitative mass spectrometry-based techniques or protein microarrays. Additionally, we will also focus on the diverse biological samples used for CRC biomarker discovery such as tissue, serum and faeces, besides cell lines and murine models, discussing their advantages and disadvantages, and summarize the most frequently identified candidate CRC markers.

Indexed as

AnimalsBiomarkers, TumorCell Line, TumorColorectal NeoplasmsElectrophoresis, Gel, Two-DimensionalFecesHumansMass SpectrometryMiceMutationNeoplasm ProteinsProtein Array AnalysisProteomeProteomicsSubcellular FractionsBiomarkers, TumorNeoplasm ProteinsProteomeBiomarkersColorectal cancerMass spectrometryProtein identificationProteinsProteomicsSerumTissue

Identifiers

PMID24744574
PMCPMC3983438
OpenAlexW2126029031

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.