Evidence map›Paper›PMID 24743597›Full record

ArticleMolecular biology of the cell2014

The adaptor protein GULP promotes Jedi-1-mediated phagocytosis through a clathrin-dependent mechanism.

Chelsea S Sullivan, Jami L Scheib, Zhong Ma, Rajan P Dang, Johanna M Schafer, Francis E Hickman, Frances M Brodsky, Kodi S Ravichandran, Bruce D Carter

Abstract read
In one paragraph

Article in Molecular biology of the cell, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
1.2field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 18 citations in OpenAlex.

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  13. A Study to Investigate the Role ofImmunological disorders & immunotherapy · 2016
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 1 country.

Chelsea S SullivanDepartment of Biochemistry, Vanderbilt Brain Institute, Vanderbilt University School of Medicine, Nashville, TN 37232.
Jami L ScheibDepartment of Biochemistry, Vanderbilt Brain Institute, Vanderbilt University School of Medicine, Nashville, TN 37232.
Zhong MaCenter for Cell Clearance and Department of Microbiology, Immunology, and Cancer Biology, University of Virginia School of Medicine, Charlottesville, VA 22908.
Rajan P DangDepartment of Biochemistry, Vanderbilt Brain Institute, Vanderbilt University School of Medicine, Nashville, TN 37232.
Johanna M SchaferDepartment of Biochemistry, Vanderbilt Brain Institute, Vanderbilt University School of Medicine, Nashville, TN 37232.
Francis E HickmanDepartment of Biochemistry, Vanderbilt Brain Institute, Vanderbilt University School of Medicine, Nashville, TN 37232.
Frances M BrodskyDepartment of Bioengineering and Therapeutic Sciences, Department of Microbiology and Immunology, and Department of Pharmaceutical Chemistry, G. W. Hooper Foundation, University of California, San Francisco, San Francisco, CA 94143.
Kodi S RavichandranCenter for Cell Clearance and Department of Microbiology, Immunology, and Cancer Biology, University of Virginia School of Medicine, Charlottesville, VA 22908.
Bruce D CarterDepartment of Biochemistry, Vanderbilt Brain Institute, Vanderbilt University School of Medicine, Nashville, TN 37232 bruce.carter@vanderbilt.edu.
Vanderbilt University · USUniversity of Virginia · USUniversity of California, San Francisco · US

Funding

MULTIDISCIPLINARY TRAINING IN MOLECULAR ENDOCRINOLOGYT32DK007563 · NIDDK · VANDERBILT UNIVERSITY · PI Richard M O'Brien · 1988 to 2026
$15.9M
THE MOLECULAR MECHANISM OF CLATHRIN ASSEMBLYR01GM038093 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI BRODSKY, FRANCES M. · 1988 to 2014
$5.0M
Global Biothreats Training ProgramT32AI055432 · NIAID · UNIVERSITY OF VIRGINIA CHARLOTTESVILLE · PI CRISS, ALISON K, PETRI, WILLIAM A · 2003 to 2022
$4.0M
Role of ELMO and DOCK 180 in signaling to engulfmentR01GM064709 · NIGMS · UNIVERSITY OF VIRGINIA CHARLOTTESVILLE · PI LORENZ, ULRIKE, RAVICHANDRAN, KODI S · 2003 to 2016
$3.6M
Phagocytosis of dying cells, adult neurogenesis and depressionR01MH096484 · NIMH · UNIVERSITY OF VIRGINIA · PI KIPNIS, JONATHAN, RAVICHANDRAN, KODI S · 2012 to 2016
$2.0M
Mechanisms of apoptotic neuron clearance in the peripheral nervous systemR01NS064278 · NINDS · VANDERBILT UNIVERSITY · PI CARTER, BRUCE D · 2009 to 2013
$1.7M
Phagocytosis of apoptotic cells: Signaling via GULPR01GM069998 · NIGMS · UNIVERSITY OF VIRGINIA CHARLOTTESVILLE · PI RAVICHANDRAN, KODI S · 2004 to 2007
$953k
Mechanisms of Jedi-mediated engulfment of apoptotic cellsF31NS080483 · NINDS · VANDERBILT UNIVERSITY · PI SULLIVAN, CHELSEA SUZANNE · 2013 to 2014
$40k
NIAID NIH HHS T32 AI055432NIDDK NIH HHS T32 DK007563NIGMS NIH HHS R01 GM038093NIGMS NIH HHS R01 GM064709NIGMS NIH HHS R01 GM069998NIGMS NIH HHS R01GM069998NIMH NIH HHS R01 MH096484NIMH NIH HHS R01MH096484NINDS NIH HHS F31 NS080483NINDS NIH HHS F31NS080483NINDS NIH HHS R01 NS064278NINDS NIH HHS R01NS064278
6 · The paper itself

Abstract

During the development of the peripheral nervous system, the large number of apoptotic neurons generated are phagocytosed by glial precursor cells. This clearance is mediated, in part, through the mammalian engulfment receptor Jedi-1. However, the mechanisms by which Jedi-1 mediates phagocytosis are poorly understood. Here we demonstrate that Jedi-1 associates with GULP, the mammalian homologue of CED-6, an adaptor protein required for phagocytosis mediated by the nematode engulfment receptor CED-1. Silencing GULP or mutating the NPXY motif in Jedi-1, which is required for GULP binding, prevents Jedi-1-mediated phagocytosis. How GULP promotes engulfment is not known. Of interest, we find that Jedi-1-induced phagocytosis requires GULP binding to clathrin heavy chain (CHC). During engulfment, CHC is tyrosine phosphorylated, which is required for Jedi-mediated engulfment. Both phosphoclathrin and actin accumulate around engulfed microspheres. Furthermore, knockdown of CHC in HeLa cells prevents Jedi-1-mediated engulfment of microspheres, and knockdown in glial precursors prevents the engulfment of apoptotic neurons. Taken together, these results reveal that Jedi-1 signals through recruitment of GULP, which promotes phagocytosis through a noncanonical phosphoclathrin-dependent mechanism.

Indexed as

Phagocytosis3T3 CellsActinsAdaptor Proteins, Signal TransducingAmino Acid MotifsAnimalsClathrinHeLa CellsHumansMembrane ProteinsMiceProtein Interaction Domains and MotifsProtein TransportActinsAdaptor Proteins, Signal TransducingClathrinGULP protein, mouseJedi protein, mouseMembrane Proteins

Identifiers

PMID24743597
PMCPMC4055271
OpenAlexW2132599663

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.