Evidence map›Paper›PMID 24743264›Full record

ArticlePloS one2014

Phenotypic resistance and the dynamics of bacterial escape from phage control.

James J Bull, Christina Skovgaard Vegge, Matthew Schmerer, Waqas Nasir Chaudhry, Bruce R Levin

Abstract read
In one paragraph

Article in PloS one, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 71 papers.

0numbers the graph read from it
0cells of the map it votes in
71citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

71 citing papers in PubMed.

  1. Article
  2. Viruses · 2026
    Article
  3. Article
  4. bioRxiv : the preprint server for biology · 2026
    Article
  5. Article
  6. Article
  7. The intestinal environment potentiates bacteriophage adaptation in response to phenotypic resistance inProceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  8. Characterization and genome analyses of the novel phages targeting extraintestinal Escherichia coli clones ST131 and ST410.International microbiology : the official journal of the Spanish Society for Microbiology · 2025
    Article
  9. Quantifying phage infectivity from characteristics of bacterial population dynamics.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  10. Article
  11. Article
  12. Challenges and opportunities of phage therapy forApplied and environmental microbiology · 2024
    Review
  13. Review
  14. Article
  15. Article
  16. Back to the Roots:Applied and environmental microbiology · 2023
    Article
  17. Article
  18. Review
  19. Review
  20. Article

11 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

James J BullThe Institute for Cellular and Molecular Biology, The University of Texas, Austin, Texas, United States of America; Center for Computational Biology and Bioinformatics, The University of Texas, Austin, Texas, United States of America; Department of Integrative Biology, The University of Texas, Austin, Texas, United States of America.
Christina Skovgaard VeggeDepartment of Veterinary Disease Biology, University of Copenhagen, Frederiksberg, Denmark.
Matthew SchmererDepartment of Integrative Biology, The University of Texas, Austin, Texas, United States of America.
Waqas Nasir ChaudhryDepartment of Biology, Emory University, Atlanta, Georgia, United States of America; Atta-ur-Rahman School of Applied Biosciences, National University of Sciences and Technology, Islamabad, Pakistan.
Bruce R LevinDepartment of Biology, Emory University, Atlanta, Georgia, United States of America.

Funding

Experimental viral evolution at high mutation rateR01GM057756 · NIGMS · UNIVERSITY OF TEXAS AUSTIN · PI BULL, JAMES J · 1998 to 2013
$2.9M
Theoretical and experimental strudy of the population and evolutionary dynamics oR01GM091875 · NIGMS · EMORY UNIVERSITY · PI LEVIN, BRUCE RICHARD · 2009 to 2017
$2.5M
NIGMS NIH HHS GM 091875NIGMS NIH HHS GM57756NIGMS NIH HHS R01 GM057756NIGMS NIH HHS R01 GM091875
6 · The paper itself

Abstract

The canonical view of phage - bacterial interactions in dense, liquid cultures is that the phage will eliminate most of the sensitive cells; genetic resistance will then ascend to restore high bacterial densities. Yet there are various mechanisms by which bacteria may remain sensitive to phages but still attain high densities in their presence - because bacteria enter a transient state of reduced adsorption. Importantly, these mechanisms may be cryptic and inapparent prior to the addition of phage yet result in a rapid rebound of bacterial density after phage are introduced. We describe mathematical models of these processes and suggest how different types of this 'phenotypic' resistance may be elucidated. We offer preliminary in vitro studies of a previously characterized E. coli model system and Campylobacter jejuni illustrating apparent phenotypic resistance. As phenotypic resistance may be specific to the receptors used by phages, awareness of its mechanisms may identify ways of improving the choice of phages for therapy. Phenotypic resistance can also explain several enigmas in the ecology of phage-bacterial dynamics. Phenotypic resistance does not preclude the evolution of genetic resistance and may often be an intermediate step to genetic resistance.

Indexed as

PhenotypeAdsorptionBacteriophagesCampylobacter jejuniEscherichia coliMicrobial ViabilityModels, Biological

Identifiers

PMID24743264
PMCPMC3990542

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.