Evidence map›Paper›PMID 24741066›Full record

ArticleJournal of cell science2014

Interphase phosphorylation of lamin A.

Vitaly Kochin, Takeshi Shimi, Elin Torvaldson, Stephen A Adam, Anne Goldman, Chan-Gi Pack, Johanna Melo-Cardenas, Susumu Y Imanishi, Robert D Goldman, John E Eriksson

Abstract read
In one paragraph

Article in Journal of cell science, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 125 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
125citing papers in PubMed, 1 pooled it
5.6field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

125 citing papers in PubMed, 1 synthesis or guideline pooled it, 171 citations in OpenAlex.

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65 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 5 institutions in 3 countries.

Vitaly KochinTurku Centre for Biotechnology, University of Turku and Åbo Akademi University, FIN-20521 Turku, Finland Department of Biosciences, Åbo Akademi University, FIN-20520 Turku, Finland Department of Pathology, Sapporo Medical University, Sapporo, Hokkaido 060-8556, Japan.
Takeshi ShimiNorthwestern University Feinberg School of Medicine, Department of Cell and Molecular Biology, Chicago, IL 60611, USA.
Elin TorvaldsonTurku Centre for Biotechnology, University of Turku and Åbo Akademi University, FIN-20521 Turku, Finland Department of Biosciences, Åbo Akademi University, FIN-20520 Turku, Finland.
Stephen A AdamNorthwestern University Feinberg School of Medicine, Department of Cell and Molecular Biology, Chicago, IL 60611, USA.
Anne GoldmanNorthwestern University Feinberg School of Medicine, Department of Cell and Molecular Biology, Chicago, IL 60611, USA.
Chan-Gi PackCellular Informatics Laboratory, RIKEN, Wako-shi, Saitama 351-0198, Japan.
Johanna Melo-CardenasNorthwestern University Feinberg School of Medicine, Department of Cell and Molecular Biology, Chicago, IL 60611, USA.
Susumu Y ImanishiTurku Centre for Biotechnology, University of Turku and Åbo Akademi University, FIN-20521 Turku, Finland.
Robert D GoldmanNorthwestern University Feinberg School of Medicine, Department of Cell and Molecular Biology, Chicago, IL 60611, USA.
John E ErikssonTurku Centre for Biotechnology, University of Turku and Åbo Akademi University, FIN-20521 Turku, Finland Department of Biosciences, Åbo Akademi University, FIN-20520 Turku, Finland john.eriksson@abo.fi.
Northwestern University · USTurku Centre for Biotechnology · FIÅbo Akademi University · FIRIKEN · JPUniversity of Turku · FI

Funding

Super-resolution microscopy of nuclear lamin and spindle envelope/matrix functionR01GM106023 · NIGMS · CARNEGIE INSTITUTION OF WASHINGTON, D.C. · PI GOLDMAN, ROBERT D, ZHENG, YIXIAN · 2013 to 2020
$3.5M
NCI NIH HHS CA03176NIGMS NIH HHS GM106023NIGMS NIH HHS R01 GM106023
6 · The paper itself

Abstract

Nuclear lamins form the major structural elements that comprise the nuclear lamina. Loss of nuclear structural integrity has been implicated as a key factor in the lamin A/C gene mutations that cause laminopathies, whereas the normal regulation of lamin A assembly and organization in interphase cells is still undefined. We assumed phosphorylation to be a major determinant, identifying 20 prime interphase phosphorylation sites, of which eight were high-turnover sites. We examined the roles of these latter sites by site-directed mutagenesis, followed by detailed microscopic analysis - including fluorescence recovery after photobleaching, fluorescence correlation spectroscopy and nuclear extraction techniques. The results reveal three phosphorylation regions, each with dominant sites, together controlling lamin A structure and dynamics. Interestingly, two of these interphase sites are hyper-phosphorylated in mitotic cells and one of these sites is within the sequence that is missing in progerin of the Hutchinson-Gilford progeria syndrome. We present a model where different phosphorylation combinations yield markedly different effects on the assembly, subunit turnover and the mobility of lamin A between, and within, the lamina, the nucleoplasm and the cytoplasm of interphase cells.

Indexed as

InterphaseProtein Processing, Post-TranslationalActive Transport, Cell NucleusAmino Acid SequenceBromodomain Containing ProteinsHeLa CellsHumansLamin Type AMolecular Sequence DataNuclear LaminaPhosphorylationProtein Serine-Threonine KinasesProtein TransportTranscription FactorsBRD2 protein, humanBromodomain Containing ProteinsLamin Type ALMNA protein, humanProtein Serine-Threonine KinasesTranscription FactorsIntermediate filamentLamin APhosphorylationSequestrationSignaling

Identifiers

PMID24741066
PMCPMC4058112
OpenAlexW2314179564

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.