Evidence map›Paper›PMID 24740633›Full record

ArticleThe Journal of infectious diseases2014

HIV-1 drug resistance in the iPrEx preexposure prophylaxis trial.

Teri Liegler, Mohamed Abdel-Mohsen, L Gordon Bentley, Robert Atchison, Timothy Schmidt, Jacqueline Javier, Megha Mehrotra, Christopher Eden, David V Glidden, Vanessa McMahan and 7 more

Registry-linked trialAbstract read
In one paragraph

Article in The Journal of infectious diseases, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It is linked to trial NCT00458393 (Chemoprophylaxis for HIV Prevention in Men), which is not on this map. Cited by 43 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
43citing papers in PubMed, 2 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT00458393 phase3completednot on this map

Chemoprophylaxis for HIV Prevention in Men

TypeinterventionalSponsorNational Institute of Allergy and Infectious Diseases (NIAID)Ran2007 to 2014Enrolled2,499ConditionsHIV InfectionsArmsdaily TDF/FTC, Placebo
3 · Its place in the literature

Who cites it

43 citing papers in PubMed, 2 syntheses or guidelines pooled it.

  1. Pooled it
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  3. Trial
  4. Trial
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  6. Review
  7. Review
  8. Article
  9. Use of Drug-level Testing and Single-genome Sequencing to Unravel a Case of Human Immunodeficiency Virus Seroconversion on Pre-exposure Prophylaxis.Clinical infectious diseases : an official publication of the Infectious Diseases Society of America · 2021
    Article
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  14. Review
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  19. Article
  20. HIV-1 drug resistance and resistance testing.Infection, genetics and evolution : journal of molecular epidemiology and evolutionary genetics in infectious diseases · 2016
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors.

Teri LieglerDepartment of Medicine, University of California AIDS Research Institute, University of California.
Mohamed Abdel-MohsenDepartment of Medicine, University of California.
L Gordon BentleyJ. David Gladstone Institutes.
Robert AtchisonJ. David Gladstone Institutes.
Timothy SchmidtAIDS Research Institute, University of California.
Jacqueline JavierAIDS Research Institute, University of California.
Megha MehrotraJ. David Gladstone Institutes.
Christopher EdenJ. David Gladstone Institutes.
David V GliddenDepartment of Epidemiology, University of California, San Francisco.
Vanessa McMahanJ. David Gladstone Institutes.
Peter L AndersonDepartment of Pharmaceutical Sciences, University of Colorado Denver, Aurora.
Peilin LiVeterans Affairs Medical Center, San Francisco.
Joseph K WongVeterans Affairs Medical Center, San Francisco.
Susan BuchbinderBridge HIV, San Francisco Department of Public Health, California.
Juan V GuaniraAsociación Civil Impacta Salud y Educación, Lima, Peru.
Robert M GrantDepartment of Medicine, University of California J. David Gladstone Institutes.
iPrEx Study Team

Funding

Virology CoreP30AI027763 · NIAID · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI STEVEN Grant DEEKS · 1988 to 2026
$93.6M
Ujima Mentoring ProgramP30MH062246 · NIMH · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI Sheri Ann Lippman · 2001 to 2026
$57.4M
Chemoprophylaxis and HIV-Host InteractionsR01AI062333 · NIAID · J. DAVID GLADSTONE INSTITUTES · PI GRANT, ROBERT M. · 2004 to 2011
$6.2M
Cellular pharmacology of tenofovir and emtricitabine for HIV prophylaxisU01AI084735 · NIAID · UNIVERSITY OF COLORADO DENVER · PI ANDERSON, PETER L. · 2009 to 2012
$4.2M
Role of Gut Associated Lymphoid Tissue in HIV PersistenceR56AI091573 · NIAID · NORTHERN CALIFORNIA INSTITUTE/RES/EDU · PI WONG, JOSEPH K · 2011 to 2011
$643k
Adjuvants for Mucosal ImmunityR43AI060042 · NIAID · NEUROME, INC. · PI LO, DAVID D · 2004 to 2005
$469k
Effects of Acitretin on the activation of latent HIVR21AI104445 · NIAID · NORTHERN CALIFORNIA INSTITUTE/RES/EDU · PI LI, PEILIN · 2013 to 2014
$410k
The contribution of Tcell tolerance to latent HIV infectionI01BX001048 · VA · VETERANS AFFAIRS MED CTR SAN FRANCISCO · PI WONG, JOSEPH K · 2011 to 2014
–
BLRD VA I01 BX001048Intramural VA VA999999NIAID NIH HHS P30 AI027763NIAID NIH HHS R01 AI062333NIAID NIH HHS R21 AI104445NIAID NIH HHS R43 AI060042NIAID NIH HHS R56 AI091573NIAID NIH HHS U01 AI084735NIAID NIH HHS U01 AI60042NIAID NIH HHS U01 AI84735NIMH NIH HHS P30 MH062246
6 · The paper itself

Abstract

backgroundThe iPrEx study demonstrated that combination oral emtricitabine and tenofovir disoproxil fumarate (FTC/TDF) as preexposure prophylaxis (PrEP) protects against HIV acquisition in men who have sex with men and transgender women. Selection for drug resistance could offset PrEP benefits.

methodsPhenotypic and genotypic clinical resistance assays characterized major drug resistant mutations. Minor variants with FTC/TDF mutations K65R, K70E, M184V/I were measured using 454 deep sequencing and a novel allele-specific polymerase chain reaction (AS-PCR) diagnostic tolerant to sequence heterogeneity.

resultsControl of primer-binding site heterogeneity resulted in improved accuracy of minor variant measurements by AS-PCR. Of the 48 on-study infections randomized to FTC/TDF, none showed FTC/TDF mutations by clinical assays despite detectable drug levels in 8 participants. Two randomized to FTC/TDF had minor variant M184I detected at 0.53% by AS-PCR or 0.75% by deep sequencing, only 1 of which had low but detectable drug levels. Among those with acute infection at randomization to FTC/TDF, M184V or I mutations that were predominant at seroconversion waned to background levels within 24 weeks after discontinuing drug.

conclusionsDrug resistance was rare in iPrEx on-study FTC/TDF-randomized seroconverters, and only as low-frequency minor variants. FTC resistance among those initiating PrEP with acute infection waned rapidly after drug discontinuation. Clinical Trials Registration.NCT00458393.

Indexed as

Drug Resistance, ViralAdenineAnti-HIV AgentsDeoxycytidineEmtricitabineFemaleGenotypeHIV-1HIV InfectionsHomosexuality, MaleHumansMaleMutationOrganophosphonatesRNA, ViralTenofovirAdenineAnti-HIV AgentsDeoxycytidineEmtricitabineOrganophosphonatesRNA, ViralTenofovir454 deep sequencingAS-PCRdrug resistanceFTC/TDFHIV-1minor variantpreexposure prophylaxisPrEP

Identifiers

PMID24740633
PMCPMC4176446

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Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.