Evidence map›Paper›PMID 24739399›Full record

ArticlePigment cell & melanoma research2014

Molecular analysis of common polymorphisms within the human Tyrosinase locus and genetic association with pigmentation traits.

Kasturee Jagirdar, Darren J Smit, Stephen A Ainger, Katie J Lee, Darren L Brown, Brett Chapman, Zhen Zhen Zhao, Grant W Montgomery, Nicholas G Martin, Jennifer L Stow and 2 more

Open access · greenAbstract read
In one paragraph

Article in Pigment cell & melanoma research, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 34 papers.

0numbers the graph read from it
0cells of the map it votes in
34citing papers in PubMed
1.7field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

34 citing papers in PubMed, 65 citations in OpenAlex.

  1. Article
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  8. Genotype-Phenotype Correlation Model for the Spectrum ofDiagnostics (Basel, Switzerland) · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 2 institutions in 1 country.

Kasturee JagirdarInstitute for Molecular Bioscience, University of Queensland, Brisbane, Qld, Australia.
Darren J Smit
Stephen A Ainger
Katie J Lee
Darren L Brown
Brett Chapman
Zhen Zhen Zhao
Grant W Montgomery
Nicholas G Martin
Jennifer L Stow
David L Duffy
Richard A Sturm
University of Queensland · AUQIMR Berghofer Medical Research Institute · AU

Funding

Pathways from genotype and environment to melanomaR01CA088363 · NCI · QUEENSLAND INSTITUTE OF MEDICAL RESEARCH · PI HAYWARD, NICHOLAS K · 2001 to 2012
$2.4M
NCI NIH HHS CA88363NCI NIH HHS R01 CA088363
6 · The paper itself

Abstract

We have compared the melanogenic activities of cultured melanocytes carrying two common TYR alleles as homozygous 192S-402R wild-type, heterozygous and homozygous variant. This includes assays of TYR protein, DOPAoxidase activity, glycosylation and temperature sensitivity of protein and DOPAoxidase levels. Homozygous wild-type strains on average had higher levels of TYR protein and enzyme activity than other genotypes. Homozygous 402Q/Q melanocytes produced significantly less TYR protein, displayed altered trafficking and glycosylation, with reduced DOPAoxidase. However, near wild-type TYR activity levels could be recovered at lower growth temperature. In a sample population from Southeast Queensland, these two polymorphisms were present on four TYR haplotypes, designated as WT 192S-402R, 192Y-402R and 192S-402Q with a double-variant 192Y-402Q of low frequency at 1.9%. Based on cell culture findings and haplotype associations, we have used an additive model to assess the penetrance of the ten possible TYR genotypes derived from the combination of these haplotypes.

Indexed as

AllelesHaplotypesMonophenol MonooxygenasePolymorphism, GeneticQuantitative Trait LociHumansMaleMelanocytesModels, GeneticPenetranceQueenslandSkin PigmentationMonophenol Monooxygenasealbinismmelaninmelanocytepigmentationtyrosinase

Identifiers

PMID24739399
PMCPMC4119297
OpenAlexW2107202043

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.