Evidence map›Paper›PMID 24739169›Full record

ArticleBiophysical journal2014

Water-peptide site-specific interactions: a structural study on the hydration of glutathione.

Ernesto Scoppola, Armida Sodo, Sylvia E McLain, Maria Antonietta Ricci, Fabio Bruni

Open access · bronzeAbstract read
In one paragraph

Article in Biophysical journal, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
3.3field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 49 citations in OpenAlex.

  1. Review
  2. Review
  3. Trimethylamine-N-oxide depletes urea in a peptide solvation shell.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  4. Article
  5. Review
  6. Location and Conformation of the LKα14 Peptide in Water/Ethanol Mixtures.Langmuir : the ACS journal of surfaces and colloids · 2021
    Article
  7. Article
  8. Article
  9. Protein Solvent Shell Structure Provides Rapid Analysis of Hydration Dynamics.Journal of chemical information and modeling · 2019
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 2 countries.

Ernesto ScoppolaDipartimento di Scienze, Università degli Studi di Roma Tre, Via della Vasca Navale 84, 00146 Roma, Italy.
Armida SodoDipartimento di Scienze, Università degli Studi di Roma Tre, Via della Vasca Navale 84, 00146 Roma, Italy.
Sylvia E McLainDepartment of Biochemistry, University of Oxford, South Park Road, Oxford, Oxfordshire OX1 3QU.
Maria Antonietta RicciDipartimento di Scienze, Università degli Studi di Roma Tre, Via della Vasca Navale 84, 00146 Roma, Italy.
Fabio BruniDipartimento di Scienze, Università degli Studi di Roma Tre, Via della Vasca Navale 84, 00146 Roma, Italy. Electronic address: fabio.bruni@uniroma3.it.
Roma Tre University · ITUniversity of Oxford · GB

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Water-peptide interactions play an important role in determining peptide structure and function. Nevertheless, a microscopic description of these interactions is still incomplete. In this study we have investigated at the atomic scale length the interaction between water and the tripeptide glutathione. The rationale behind this work, based on the combination between a neutron diffraction experiment and a computer simulation, is twofold. It extends previous studies on amino acids, addressing issues such as the perturbation of the water network brought by a larger biomolecule in solution. In addition, and more importantly, it seeks a possible link between the atomic length scale description of the glutathione-water interaction with the specific biological functionality of glutathione, an important intracellular antioxidant. Results indicate a rather weak hydrogen bond between the thiol (-SH) group of cysteine and its first neighbor water molecule. This -SH group serves as a proton donor, is responsible for the biological activity of glutathione, and it is involved in the formation of glutathione disulfide, the oxidized form of glutathione. Moreover, the hydration shell of the chemically identical carboxylate group on the glutamic acid residue and on the glycine residue shows an intriguing different spatial location of water molecules and coordination numbers around the two CO2(-) groups.

Indexed as

AminesGlutamic AcidGlutathioneModels, MolecularOxygenPeptidesSolventsWaterAminesGlutamic AcidGlutathioneOxygenPeptidesSolventsWater

Identifiers

PMID24739169
PMCPMC4008841
OpenAlexW2032676774

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.