Evidence map›Paper›PMID 24738839›Full record

ArticleJournal of clinical periodontology2014

Quantitative gingival crevicular fluid proteome in health and periodontal disease using stable isotope chemistries and mass spectrometry.

Leandro G Carneiro, Hesham Nouh, Erdjan Salih

Abstract read
In one paragraph

Article in Journal of clinical periodontology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed.

  1. Review
  2. Review
  3. Article
  4. Article
  5. Article
  6. Article
  7. Alpha-Defensin 1: An Emerging Periodontitis Biomarker.Diagnostics (Basel, Switzerland) · 2023
    Article
  8. Article
  9. Pyruvate Kinase, Inflammation and Periodontal Disease.Pathogens (Basel, Switzerland) · 2021
    Review
  10. Article
  11. Review
  12. Review
  13. Review
  14. Review
  15. Identification and Modification ofFrontiers in immunology · 2020
    Article
  16. Review
  17. Review
  18. Article
  19. Review
  20. Advances of Proteomic Sciences in Dentistry.International journal of molecular sciences · 2016
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Leandro G CarneiroDepartment of Periodontology and Oral Biology, School of Dental Medicine, Boston University, Boston, MA, USA.
Hesham Nouh
Erdjan Salih

Funding

Phosphoproteomics of Oral FluidsR21DE018448 · NIDCR · BOSTON UNIVERSITY MEDICAL CAMPUS · PI SALIH, ERDJAN · 2008 to 2009
$447k
NIDCR NIH HHS DE 018448NIDCR NIH HHS R21 DE018448
6 · The paper itself

Abstract

aimApplication of quantitative stable isotope-labelling chemistries and mass spectrometry (MS) to determine alterations in gingival crevicular fluid (GCF) proteome in periodontal disease. MATERIAL AND

methodsQuantitative proteome of GCF from 40 healthy individuals versus 40 patients with periodontal disease was established using 320 GCF samples and stable isotope-labelling reagents, ICAT and mTRAQ, with MS technology and validated by enzyme-linked immunosorbent methods.

resultsWe have identified 238 distinct proteins of which 180 were quantified in GCF of both healthy and periodontal patients with additional 26 and 32 distinct proteins that were found only in GCF of healthy or periodontal patients. In addition, 42 pathogenic bacterial proteins and 11 yeast proteins were quantified. The data highlighted a series of proteins not quantified previously by large-scale MS approaches in GCF with relevance to periodontal disease, such as host-derived Ig alpha-2 chain C, Kallikrein-4, S100-A9, transmembrane proteinase 13, peptidase S1 domain, several collagen types and pathogenic bacterial proteins, e.g. formamidase, leucine aminopeptidase and virulence factor OMP85.

conclusionsThe innovative analytical approaches provided detailed novel changes in both host and microbial derived GCF proteomes of periodontal patients. The study defined 50 host and 16 pathogenic bacterial proteins significantly elevated in periodontal disease most of which were novel with significant potential for application in the clinical arena of periodontal disease.

Indexed as

AdultAlbuminsAmidohydrolasesBacterial Outer Membrane ProteinsBacterial ProteinsCalgranulin BChromatography, LiquidCollagenElectrophoresis, Polyacrylamide GelFemaleFungal ProteinsGingival Crevicular FluidHumansImmunoglobulin alpha-ChainsIsotopesKallikreinsAlbuminsAmidohydrolasesBacterial Outer Membrane ProteinsBacterial ProteinsCalgranulin BCollagenformamidaseFungal ProteinsImmunoglobulin alpha-ChainsIsotopeskallikrein 4KallikreinsLeucyl AminopeptidaseMembrane ProteinsProteomeSerine EndopeptidasesSerum AlbuminTMPRSS13 protein, humanbiomarkersdiagnosticsgingival crevicular fluidmass spectrometryperiodontal diseasequantitative proteomicsstable isotope labelling

Identifiers

PMID24738839
PMCPMC4128226

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.