Evidence map›Paper›PMID 24738645›Full record

ArticlePlant, cell & environment2015

Four Arabidopsis AREB/ABF transcription factors function predominantly in gene expression downstream of SnRK2 kinases in abscisic acid signalling in response to osmotic stress.

Takuya Yoshida, Yasunari Fujita, Kyonoshin Maruyama, Junro Mogami, Daisuke Todaka, Kazuo Shinozaki, Kazuko Yamaguchi-Shinozaki

Open access · hybridAbstract read
In one paragraph

Article in Plant, cell & environment, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 298 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
298citing papers in PubMed, 1 pooled it
42.9field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

298 citing papers in PubMed, 1 synthesis or guideline pooled it, 614 citations in OpenAlex.

  1. Pooled it
  2. Review
  3. Article
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  8. Genome-Wide Survey and Expression Profiling of bZIP Transcription Factors inInternational journal of molecular sciences · 2026
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  9. Genome-Wide Identification and Expression Profiling of theInternational journal of molecular sciences · 2026
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  14. Review
  15. Identification ofPlants (Basel, Switzerland) · 2026
    Article
  16. Review
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  20. Article

238 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 1 country.

Takuya YoshidaLaboratory of Plant Molecular Physiology, Graduate School of Agricultural and Life Sciences, The University of Tokyo, Bunkyo-ku, Tokyo, 113-8657, Japan.
Yasunari Fujita
Kyonoshin Maruyama
Junro Mogami
Daisuke Todaka
Kazuo Shinozaki
Kazuko Yamaguchi-Shinozaki
The University of Tokyo · JPJapan International Research Center for Agricultural Sciences · JPRIKEN Center for Sustainable Resource Science · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Under osmotic stress conditions such as drought and high salinity, the plant hormone abscisic acid (ABA) plays important roles in stress-responsive gene expression mainly through three bZIP transcription factors, AREB1/ABF2, AREB2/ABF4 and ABF3, which are activated by SNF1-related kinase 2s (SnRK2s) such as SRK2D/SnRK2.2, SRK2E/SnRK2.6 and SRK2I/SnRK2.3 (SRK2D/E/I). However, since the three AREB/ABFs are crucial, but not exclusive, for the SnRK2-mediated gene expression, transcriptional pathways governed by SRK2D/E/I are not fully understood. Here, we show that a bZIP transcription factor, ABF1, is a functional homolog of AREB1, AREB2 and ABF3 in ABA-dependent gene expression in Arabidopsis. Despite lower expression levels of ABF1 than those of the three AREB/ABFs, the areb1 areb2 abf3 abf1 mutant plants displayed increased sensitivity to drought and decreased sensitivity to ABA in primary root growth compared with the areb1 areb2 abf3 mutant. Genome-wide transcriptome analyses revealed that expression of downstream genes of SRK2D/E/I, which include many genes functioning in osmotic stress responses and tolerance such as transcription factors and LEA proteins, was mostly impaired in the quadruple mutant. Thus, these results indicate that the four AREB/ABFs are the predominant transcription factors downstream of SRK2D/E/I in ABA signalling in response to osmotic stress during vegetative growth.

Indexed as

Gene Expression Regulation, PlantSignal TransductionAbscisic AcidArabidopsisArabidopsis ProteinsBasic-Leucine Zipper Transcription FactorsDroughtsGene ExpressionGene Expression ProfilingGenes, ReporterMutationOligonucleotide Array Sequence AnalysisOsmotic PressurePlant Growth RegulatorsPlant RootsPlants, Genetically ModifiedABF1 protein, ArabidopsisAbscisic AcidArabidopsis ProteinsBasic-Leucine Zipper Transcription FactorsPlant Growth RegulatorsProtein Serine-Threonine KinasesSnRK2 protein, ArabidopsisABF1transcriptional regulationtranscriptome analysis.

Identifiers

PMID24738645
PMCPMC4302978
OpenAlexW2157864299

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.