Evidence map›Paper›PMID 24737717›Full record

ArticleAnnals of botany2014

SNARE VTI13 plays a unique role in endosomal trafficking pathways associated with the vacuole and is essential for cell wall organization and root hair growth in arabidopsis.

Emily R Larson, David S Domozych, Mary L Tierney

Open access · hybridAbstract read
In one paragraph

Article in Annals of botany, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
1.4field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 40 citations in OpenAlex.

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  16. Auxin and Cellular Elongation.Plant physiology · 2016
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 3 institutions in 2 countries.

Emily R LarsonCellular, Molecular and Biomedical Science Program Institute of Molecular Cell and Systems Biology, University of Glasgow College of Medical, Veterinary & Life Sciences, Glasgow G12 8QQ, UK.
David S DomozychDepartment of Biology, Skidmore College, Saratoga Springs, NY, USA.
Mary L TierneyCellular, Molecular and Biomedical Science Program Department of Plant Biology, University of Vermont, Burlington, VT, USA mary.tierney@uvm.edu.
Skidmore College · USUniversity of Glasgow · GBUniversity of Vermont · US

Funding

Vermont INBRE Administrative Supplement 2024 AWD 118P20GM103449 · NIGMS · UNIVERSITY OF VERMONT & ST AGRIC COLLEGE · PI CHRISTOPHER S FRANCKLYN · 2012 to 2026
$58.4M
INVERTED LASER-SCANNING CONFOCAL MICROSCOPE: LUNG RESEARCHS10RR019246 · NCRR · UNIVERSITY OF VERMONT &ST AGRIC COLLEGE · PI TAATJES, DOUGLAS J. · 2004 to 2004
$473k
NCRR NIH HHS 1510RR019246NCRR NIH HHS S10 RR019246NIGMS NIH HHS 8P20GM103449NIGMS NIH HHS P20 GM103449
6 · The paper itself

Abstract

BACKGROUND AND

aimsRoot hairs are responsible for water and nutrient uptake from the soil and their growth is responsive to biotic and abiotic changes in their environment. Root hair expansion is a polarized process requiring secretory and endosomal pathways that deliver and recycle plasma membrane and cell wall material to the growing root hair tip. In this paper, the role of VTI13 (AT3G29100), a member of the VTI vesicular soluble NSF attachment receptor (SNARE) gene family in Arabidopsis thaliana, in root hair growth is described.

methodsGenetic analysis and complementation of the vti13 root hair phenotypes of Arabidopsis thaliana were first used to assess the role of VTI13 in root hair growth. Transgenic lines expressing a green fluorescent protein (GFP)-VTI13 construct were used to characterize the intracellular localization of VTI13 in root hairs using confocal microscopy and immunotransmission electron microscopy. KEY

resultsVTI13 was characterized and genetic analysis used to show that its function is required for root hair growth. Expression of a GFP-VTI13 fusion in the vti13 mutant background was shown to complement the vti13 root hair phenotype. GFP-VTI13 localized to both the vacuole membrane and a mobile endosomal compartment. The function of VTI13 was also required for the localization of SYP41 to the trans-Golgi network. Immunohistochemical analysis indicated that cell wall organization is altered in vti13 root hairs and root epidermal cells.

conclusionsThese results show that VTI13 plays a unique role in endosomal trafficking pathways associated with the vacuole within root hairs and is essential for the maintenance of cell wall organization and root hair growth in arabidopsis.

Indexed as

ArabidopsisArabidopsis ProteinsBiological TransportCell MembraneCell WallEndosomesGreen Fluorescent ProteinsMultivesicular BodiesPhenotypePlant RootsSNARE Proteinstrans-Golgi NetworkVacuolesArabidopsis ProteinsGreen Fluorescent ProteinsSNARE ProteinsVTI13 protein, ArabidopsisArabidopsis thalianaearly endosomesendosomal trafficking pathwaymembrane transportplant cell wallroot hairsSNARE proteinstip growthtrans-Golgivacuolevesicle trafficking

Identifiers

PMID24737717
PMCPMC4195547
OpenAlexW2048755184

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.